RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 USP48Q86UV5 1035 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 FAM43AQ8N2R8 423 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 TMEM87AQ8NBN3 555 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
PTPRR-205ENST00000537619 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 ANKRD36CQ5JPF3 1778 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 LTBP4Q8N2S1 1624 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 CDHR2Q9BYE9 1310 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 IFIT1P09914 478 aaKnown RBP11.13□□□□□ -0.63
PTPRR-205ENST00000537619 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
PTPRR-205ENST00000537619 SCARF1Q14162 830 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 MAST3O60307 1309 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 M0R2C6 588 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 EXOC5O00471 708 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 SYTL4Q96C24 671 aaPredicted RBP11.13□□□□□ -0.63
PTPRR-205ENST00000537619 CEP126Q9P2H0 1117 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
PTPRR-205ENST00000537619 TCHHQ07283 1943 aa11.13□□□□□ -0.63
PTPRR-205ENST00000537619 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 SYCE3A1L190 88 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 MBD3O95983 291 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 TTLL11Q8NHH1 800 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPRR-205ENST00000537619 XAGE2Q96GT9 111 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 GREM2Q9H772 168 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 RIPOR2Q9Y4F9 1068 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 LRP5O75197 1615 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 SPATA31A1Q5TZJ5 1347 aa11.12□□□□□ -0.63
PTPRR-205ENST00000537619 FOXP2O15409 715 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 ADAMTS2O95450 1211 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
PTPRR-205ENST00000537619 CTSWP56202 376 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 PI16Q6UXB8 463 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 OSBP2Q969R2 916 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 NUP98P52948 1817 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 RNF113AO15541 343 aaKnown RBP11.11□□□□□ -0.63
PTPRR-205ENST00000537619 ITGA6P23229 1130 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 STK3Q13188 491 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 IFIT5Q13325 482 aaKnown RBP11.11□□□□□ -0.63
PTPRR-205ENST00000537619 LRSAM1Q6UWE0 723 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 CDC37L1Q7L3B6 337 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 VGLL2Q8N8G2 317 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 LRRC2Q9BYS8 371 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 TBC1D2BQ9UPU7 963 aa11.11□□□□□ -0.63
PTPRR-205ENST00000537619 IRS4O14654 1257 aaPredicted RBP11.1□□□□□ -0.63
PTPRR-205ENST00000537619 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
PTPRR-205ENST00000537619 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
PTPRR-205ENST00000537619 KRT32Q14532 448 aa11.1□□□□□ -0.63
PTPRR-205ENST00000537619 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
PTPRR-205ENST00000537619 DZIP3Q86Y13 1208 aaKnown RBP11.1□□□□□ -0.63
PTPRR-205ENST00000537619 MARCH10Q8NA82 808 aaPredicted RBP11.1□□□□□ -0.63
PTPRR-205ENST00000537619 ACSBG1Q96GR2 724 aa11.1□□□□□ -0.63
PTPRR-205ENST00000537619 DSCC1Q9BVC3 393 aa11.1□□□□□ -0.63
PTPRR-205ENST00000537619 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
PTPRR-205ENST00000537619 JAK2O60674 1132 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 ZAP70P43403 619 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 ANKRD1Q15327 319 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 TTC39AQ5SRH9 613 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 Q6ZUG5 572 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 ZNF34Q8IZ26 560 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 RREB1Q92766 1687 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 ERVV-1B6SEH8 477 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 FIBPO43427 364 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 IL6STP40189 918 aaPredicted RBP11.09□□□□□ -0.63
PTPRR-205ENST00000537619 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
PTPRR-205ENST00000537619 FKBP4Q02790 459 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRR-205ENST00000537619 HSP90AB3PQ58FF7 597 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 TTLL5Q6EMB2 1281 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 GTF3C6Q969F1 213 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 PPP1R9BQ96SB3 815 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 MYH3P11055 1940 aa11.09□□□□□ -0.63
PTPRR-205ENST00000537619 KAT6BQ8WYB5 2073 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 MCAMP43121 646 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 ITPK1Q13572 414 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 METTL24Q5JXM2 366 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 TRMT112Q9UI30 125 aaKnown RBP11.08□□□□□ -0.64
PTPRR-205ENST00000537619 AKAP2Q9Y2D5 859 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 AKAP11Q9UKA4 1901 aa11.08□□□□□ -0.64
PTPRR-205ENST00000537619 CRKLP46109 303 aaKnown RBP11.07□□□□□ -0.64
PTPRR-205ENST00000537619 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
PTPRR-205ENST00000537619 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 LARP1BQ659C4 914 aaKnown RBP11.07□□□□□ -0.64
PTPRR-205ENST00000537619 FAM173BQ6P4H8 233 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 E7EWF7 191 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms