RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZSCAN23Q3MJ62 389 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 TTC39AQ5SRH9 613 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 ZMYM1Q5SVZ6 1142 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 DZIP3Q86Y13 1208 aaKnown RBP18.69■□□□□ 0.58
MKS1-204ENST00000537529 SEC62Q99442 399 aaKnown RBP18.69■□□□□ 0.58
MKS1-204ENST00000537529 PANK2Q9BZ23 570 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 TPCN1Q9ULQ1 816 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 GJB2P29033 226 aa18.68■□□□□ 0.58
MKS1-204ENST00000537529 CCDC85AQ96PX6 553 aaPredicted RBP18.68■□□□□ 0.58
MKS1-204ENST00000537529 ATP6V1DQ9Y5K8 247 aa18.68■□□□□ 0.58
MKS1-204ENST00000537529 TAF6LQ9Y6J9 622 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 RIC1Q4ADV7 1423 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 ANKRD18BA2A2Z9 1011 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 RNF113AO15541 343 aaKnown RBP18.67■□□□□ 0.58
MKS1-204ENST00000537529 CHGBP05060 677 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 TTLL11Q8NHH1 800 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 XAGE2Q96GT9 111 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 DSCC1Q9BVC3 393 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
MKS1-204ENST00000537529 ABCC12Q96J65 1359 aa18.67■□□□□ 0.58
MKS1-204ENST00000537529 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
MKS1-204ENST00000537529 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
MKS1-204ENST00000537529 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
MKS1-204ENST00000537529 NEK1Q96PY6 1258 aa18.66■□□□□ 0.58
MKS1-204ENST00000537529 F13A1P00488 732 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 ITGA6P23229 1130 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 ADORA1P30542 326 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 TOB2Q14106 344 aaPredicted RBP18.65■□□□□ 0.58
MKS1-204ENST00000537529 METTL24Q5JXM2 366 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 NECAB1Q8N987 351 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 TMEM87AQ8NBN3 555 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 GREM2Q9H772 168 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 CCDC87Q9NVE4 849 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
MKS1-204ENST00000537529 PDE8AO60658 829 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 ATP2B3Q16720 1220 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 TBC1D2BQ9UPU7 963 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 RIPOR2Q9Y4F9 1068 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 MAST3O60307 1309 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 A0A0G2JS52 829 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 ZFYP08048 801 aaPredicted RBP18.64■□□□□ 0.57
MKS1-204ENST00000537529 CYP21A2P08686 494 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
MKS1-204ENST00000537529 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
MKS1-204ENST00000537529 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 HMGB1P09429 215 aaKnown RBP18.63■□□□□ 0.57
MKS1-204ENST00000537529 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
MKS1-204ENST00000537529 COL9A3Q14050 684 aaPredicted RBP18.63■□□□□ 0.57
MKS1-204ENST00000537529 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
MKS1-204ENST00000537529 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
MKS1-204ENST00000537529 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
MKS1-204ENST00000537529 AK7Q96M32 723 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 CNNM1Q9NRU3 951 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 NUP98P52948 1817 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
MKS1-204ENST00000537529 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 PDCP20941 246 aa18.62■□□□□ 0.57
MKS1-204ENST00000537529 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 MARCH10Q8NA82 808 aaPredicted RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 MTMR6Q9Y217 621 aa18.62■□□□□ 0.57
MKS1-204ENST00000537529 CICQ96RK0 1608 aaPredicted RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 INTS5Q6P9B9 1019 aaKnown RBP18.62■□□□□ 0.57
MKS1-204ENST00000537529 USP48Q86UV5 1035 aa18.62■□□□□ 0.57
MKS1-204ENST00000537529 ACSBG1Q96GR2 724 aa18.62■□□□□ 0.57
MKS1-204ENST00000537529 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
MKS1-204ENST00000537529 SLIT2O94813 1529 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 CRKLP46109 303 aaKnown RBP18.61■□□□□ 0.57
MKS1-204ENST00000537529 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 MYH3P11055 1940 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 RREB1Q92766 1687 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 LRP5O75197 1615 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 NASPP49321 788 aaPredicted RBP18.61■□□□□ 0.57
MKS1-204ENST00000537529 CSPP1Q1MSJ5 1256 aa18.61■□□□□ 0.57
MKS1-204ENST00000537529 NSFL1CQ9UNZ2 370 aaKnown RBP18.61■□□□□ 0.57
MKS1-204ENST00000537529 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
MKS1-204ENST00000537529 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
MKS1-204ENST00000537529 HSPD1P10809 573 aaKnown RBP18.6■□□□□ 0.57
MKS1-204ENST00000537529 SIK1P57059 783 aa18.6■□□□□ 0.57
MKS1-204ENST00000537529 SLFNL1Q499Z3 407 aa18.6■□□□□ 0.57
MKS1-204ENST00000537529 GDPD2Q9HCC8 539 aa18.6■□□□□ 0.57
MKS1-204ENST00000537529 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
MKS1-204ENST00000537529 CNPY2Q9Y2B0 182 aa18.6■□□□□ 0.57
MKS1-204ENST00000537529 M0R2C6 588 aa18.59■□□□□ 0.57
MKS1-204ENST00000537529 LARP1BQ659C4 914 aaKnown RBP18.59■□□□□ 0.57
MKS1-204ENST00000537529 Q6ZUG5 572 aa18.59■□□□□ 0.57
MKS1-204ENST00000537529 ZNF512BQ96KM6 892 aaPredicted RBP18.59■□□□□ 0.57
MKS1-204ENST00000537529 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
MKS1-204ENST00000537529 ZAP70P43403 619 aa18.59■□□□□ 0.57
MKS1-204ENST00000537529 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
MKS1-204ENST00000537529 VGLL2Q8N8G2 317 aa18.59■□□□□ 0.57
MKS1-204ENST00000537529 ANP32BQ92688 251 aaKnown RBP18.59■□□□□ 0.57
MKS1-204ENST00000537529 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms