RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 GSDMDP57764 484 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 CCAR2Q8N163 923 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 EXOC6BQ9Y2D4 811 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 GBP6Q6ZN66 633 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 MAP3K19Q56UN5 1328 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 GNAI1P63096 354 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 HSP90B2PQ58FF3 399 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 PDRG1Q9NUG6 133 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 USP6P35125 1406 aa12.64□□□□□ -0.39
CLSTN3-207ENST00000537408 HOXC9P31274 260 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 BIRC2Q13490 618 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 TADA2BQ86TJ2 420 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 STARD3NLO95772 234 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 L2HGDHQ9H9P8 463 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 HSP90AB2PQ58FF8 381 aa12.63□□□□□ -0.39
CLSTN3-207ENST00000537408 CLSTN1O94985 981 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 ZCCHC17Q9NP64 241 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 ATP7BP35670 1465 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 CPP00450 1065 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 TDRD7Q8NHU6 1098 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 VPS18Q9P253 973 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 SMC3Q9UQE7 1217 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 BECN2A8MW95 431 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 SEC31AO94979 1220 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 ANAPC15P60006 121 aa12.62□□□□□ -0.39
CLSTN3-207ENST00000537408 ZNF165P49910 485 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 EFCAB8A8MWE9 144 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 G3V3G9 751 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 STX6O43752 255 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 ZPR1O75312 459 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 ERLIN2O94905 339 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 F13A1P00488 732 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 EIF2S2P20042 333 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 NBPF11Q86T75 865 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 SGSM3Q96HU1 749 aa12.61□□□□□ -0.39
CLSTN3-207ENST00000537408 ERCC3P19447 782 aa12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 ZSCAN16Q9H4T2 348 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 PTCD1O75127 700 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 SDSP20132 328 aa12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 DDX19AQ9NUU7 478 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 KDM5AP29375 1690 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 FAM43BQ6ZT52 329 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
CLSTN3-207ENST00000537408 FCHSD2O94868 740 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 NF2P35240 595 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 CAMK4Q16566 473 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 SOCS7O14512 581 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 FBLN1P23142 703 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 EVCP57679 992 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 MRFAP1L1Q96HT8 127 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 URI1O94763 535 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 IRX1P78414 480 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 REXO1L1PQ8IX06 675 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-207ENST00000537408 ERLIN1O75477 346 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 UBXN6Q9BZV1 441 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 LRRFIP1Q32MZ4 808 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 CKAP2LQ8IYA6 745 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms