RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 SCARF1Q14162 830 aa20.2■□□□□ 0.82
LPCAT3-206ENST00000537179 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
LPCAT3-206ENST00000537179 DOK7Q18PE1 504 aa20.2■□□□□ 0.82
LPCAT3-206ENST00000537179 TMC4Q7Z404 712 aa20.2■□□□□ 0.82
LPCAT3-206ENST00000537179 SREBF2Q12772 1141 aa20.19■□□□□ 0.82
LPCAT3-206ENST00000537179 OTOP1Q7RTM1 612 aa20.19■□□□□ 0.82
LPCAT3-206ENST00000537179 POLLQ9UGP5 575 aa20.19■□□□□ 0.82
LPCAT3-206ENST00000537179 VIL1P09327 827 aaKnown RBP20.18■□□□□ 0.82
LPCAT3-206ENST00000537179 ZNF280AP59817 542 aaPredicted RBP20.18■□□□□ 0.82
LPCAT3-206ENST00000537179 NSFL1CQ9UNZ2 370 aaKnown RBP20.18■□□□□ 0.82
LPCAT3-206ENST00000537179 SCAF8Q9UPN6 1271 aaKnown RBP20.18■□□□□ 0.82
LPCAT3-206ENST00000537179 PITPNM2Q9BZ72 1349 aa20.18■□□□□ 0.82
LPCAT3-206ENST00000537179 C6orf229H3BNL8 230 aa20.17■□□□□ 0.82
LPCAT3-206ENST00000537179 PER1O15534 1290 aaPredicted RBP20.17■□□□□ 0.82
LPCAT3-206ENST00000537179 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
LPCAT3-206ENST00000537179 ZNF646O15015 1829 aaPredicted RBP20.16■□□□□ 0.82
LPCAT3-206ENST00000537179 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
LPCAT3-206ENST00000537179 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 GPSM2P81274 684 aa20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 TTLL12Q14166 644 aaPredicted RBP20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 LRP10Q7Z4F1 713 aa20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 SLC17A8Q8NDX2 589 aa20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 ARMC5Q96C12 935 aa20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 OTUD5Q96G74 571 aa20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 ERBB4Q15303 1308 aa20.15■□□□□ 0.82
LPCAT3-206ENST00000537179 PRAMEF18Q5VWM3 479 aa20.14■□□□□ 0.81
LPCAT3-206ENST00000537179 NLRP10Q86W26 655 aa20.14■□□□□ 0.81
LPCAT3-206ENST00000537179 CELF1Q92879 486 aaKnown RBP20.14■□□□□ 0.81
LPCAT3-206ENST00000537179 EYA3Q99504 573 aa20.14■□□□□ 0.81
LPCAT3-206ENST00000537179 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
LPCAT3-206ENST00000537179 LAMA3Q16787 3333 aa20.14■□□□□ 0.81
LPCAT3-206ENST00000537179 SH3TC1Q8TE82 1336 aa20.13■□□□□ 0.81
LPCAT3-206ENST00000537179 PTPN22Q9Y2R2 807 aa20.13■□□□□ 0.81
LPCAT3-206ENST00000537179 H0YGN5 161 aa20.12■□□□□ 0.81
LPCAT3-206ENST00000537179 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
LPCAT3-206ENST00000537179 TBC1D16Q8TBP0 767 aa20.12■□□□□ 0.81
LPCAT3-206ENST00000537179 MYOZ2Q9NPC6 264 aa20.12■□□□□ 0.81
LPCAT3-206ENST00000537179 TRMT112Q9UI30 125 aaKnown RBP20.12■□□□□ 0.81
LPCAT3-206ENST00000537179 ALDH1A1P00352 501 aa20.11■□□□□ 0.81
LPCAT3-206ENST00000537179 AGBL3Q8NEM8 1001 aa20.11■□□□□ 0.81
LPCAT3-206ENST00000537179 PTPN12Q05209 780 aaKnown RBP20.1■□□□□ 0.81
LPCAT3-206ENST00000537179 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
LPCAT3-206ENST00000537179 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
LPCAT3-206ENST00000537179 TCIRG1Q13488 830 aa20.09■□□□□ 0.81
LPCAT3-206ENST00000537179 PDIA6Q15084 440 aa20.09■□□□□ 0.81
LPCAT3-206ENST00000537179 PROSER3Q2NL68 480 aa20.09■□□□□ 0.81
LPCAT3-206ENST00000537179 CHRDL2Q6WN34 429 aa20.09■□□□□ 0.81
LPCAT3-206ENST00000537179 GMLQ99445 158 aa20.09■□□□□ 0.81
LPCAT3-206ENST00000537179 ANXA1P04083 346 aa20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 USP17L8P0C7I0 530 aa20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 HSP90AB3PQ58FF7 597 aa20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 SPRYD7Q5W111 196 aa20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 CD99L2Q8TCZ2 262 aa20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 ERO1AQ96HE7 468 aa20.08■□□□□ 0.81
LPCAT3-206ENST00000537179 IFNL1Q8IU54 200 aa20.07■□□□□ 0.8
LPCAT3-206ENST00000537179 NECTIN2Q92692 538 aa20.07■□□□□ 0.8
LPCAT3-206ENST00000537179 ZNF428Q96B54 188 aa20.07■□□□□ 0.8
LPCAT3-206ENST00000537179 TMEM106CQ9BVX2 250 aa20.07■□□□□ 0.8
LPCAT3-206ENST00000537179 ZC3H12CQ9C0D7 883 aaKnown RBP20.07■□□□□ 0.8
LPCAT3-206ENST00000537179 NF2P35240 595 aa20.06■□□□□ 0.8
LPCAT3-206ENST00000537179 NBPF9Q3BBW0 867 aa20.06■□□□□ 0.8
LPCAT3-206ENST00000537179 ZNF333Q96JL9 665 aa20.06■□□□□ 0.8
LPCAT3-206ENST00000537179 CFAP53Q96M91 514 aa20.06■□□□□ 0.8
LPCAT3-206ENST00000537179 RBM27Q9P2N5 1060 aaKnown RBP20.06■□□□□ 0.8
LPCAT3-206ENST00000537179 UNC80Q8N2C7 3258 aa20.06■□□□□ 0.8
LPCAT3-206ENST00000537179 G3V3G9 751 aa20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 IGF2BP3O00425 579 aaKnown RBP eCLIP20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 CAP1Q01518 475 aa20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 PRKG1Q13976 671 aa20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 DCAF8Q5TAQ9 597 aa20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 EFCC1Q9HA90 598 aa20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
LPCAT3-206ENST00000537179 MANSC4A6NHS7 340 aaPredicted RBP20.04■□□□□ 0.8
LPCAT3-206ENST00000537179 UFL1O94874 794 aa20.04■□□□□ 0.8
LPCAT3-206ENST00000537179 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
LPCAT3-206ENST00000537179 ARMC9Q7Z3E5 817 aa20.04■□□□□ 0.8
LPCAT3-206ENST00000537179 LDLRAD1Q5T700 205 aa20.03■□□□□ 0.8
LPCAT3-206ENST00000537179 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
LPCAT3-206ENST00000537179 ZSWIM8A7E2V4 1837 aa20.02■□□□□ 0.8
LPCAT3-206ENST00000537179 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.8
LPCAT3-206ENST00000537179 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.8
LPCAT3-206ENST00000537179 INHBEP58166 350 aa20.02■□□□□ 0.8
LPCAT3-206ENST00000537179 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
LPCAT3-206ENST00000537179 CRHR2Q13324 411 aa20.01■□□□□ 0.79
LPCAT3-206ENST00000537179 COPS6Q7L5N1 327 aa20.01■□□□□ 0.79
LPCAT3-206ENST00000537179 XAGE3Q8WTP9 111 aa20.01■□□□□ 0.79
LPCAT3-206ENST00000537179 FZD1Q9UP38 647 aa20.01■□□□□ 0.79
LPCAT3-206ENST00000537179 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
LPCAT3-206ENST00000537179 WNT10BO00744 389 aa20■□□□□ 0.79
LPCAT3-206ENST00000537179 GGA1Q9UJY5 639 aa20■□□□□ 0.79
LPCAT3-206ENST00000537179 ANGEL1Q9UNK9 670 aaKnown RBP20■□□□□ 0.79
LPCAT3-206ENST00000537179 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 USP17L3A6NCW0 530 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 USP17L4A6NCW7 530 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 ZBTB48P10074 688 aaPredicted RBP19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 SLC4A8Q2Y0W8 1093 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 SLC9C1Q4G0N8 1177 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms