RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZSCAN16Q9H4T2 348 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 RAB11FIP3O75154 756 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 CCDC50Q8IVM0 306 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 SGSM2O43147 1006 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 CPP00450 1065 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 ENOX2Q16206 610 aaKnown RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 PUF60Q9UHX1 559 aaKnown RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 DNA2P51530 1060 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 GOLGA1Q92805 767 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 CLSTN2Q9H4D0 955 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 PYCARDQ9ULZ3 195 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 CEP152O94986 1710 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 SYT1P21579 422 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 ETF1P62495 437 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RBM43Q6ZSC3 357 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 HDXQ7Z353 690 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 HNRNPLLQ8WVV9 542 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CHAMP1Q96JM3 812 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 OSBPL5Q9H0X9 879 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CTAGE15A4D2H0 777 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CTAGE8P0CG41 777 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CPSF1Q10570 1443 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 HSP90AA4PQ58FG1 418 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CTAGE6Q86UF2 777 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CTAGE4Q8IX94 777 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 ESYT1Q9BSJ8 1104 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 MYO6Q9UM54 1294 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 INCENPQ9NQS7 918 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 BSDC1Q9NW68 430 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RHOXF2BP0C7M4 288 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 HMGB2P26583 209 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 EVCP57679 992 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 KLHL10Q6JEL2 608 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 LRRC8AQ8IWT6 810 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RHOXF2Q9BQY4 288 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RIMBP3CA6NJZ7 1639 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RIMBP3BA6NNM3 1639 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RIMBP3Q9UFD9 1639 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 ZBTB22O15209 634 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 MATR3P43243 847 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 NOP2P46087 812 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 C1orf141Q5JVX7 400 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 CEP112Q8N8E3 955 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 PREX2Q70Z35 1606 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 F6X3S4 739 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 SCLT1Q96NL6 688 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 PLEKHG2Q9H7P9 1386 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 PPFIA4O75335 1185 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 HSPA2P54652 639 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 SECISBP2LQ93073 1101 aaKnown RBP6.19□□□□□ -1.42
PTPRD-213ENST00000537002 RABEP2Q9H5N1 569 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 MIS18AQ9NYP9 233 aa6.19□□□□□ -1.42
PTPRD-213ENST00000537002 ERLIN2O94905 339 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 DDX58O95786 925 aaKnown RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 KARSQ15046 597 aaKnown RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 SLC3A2P08195 630 aaKnown RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 MAATS1Q7Z4T9 603 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 FAM71BQ8TC56 605 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 NBPF7P0C2Y1 421 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 EPS15P42566 896 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 SMC1AQ14683 1233 aaKnown RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 SLMAPQ14BN4 828 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 NFE2L2Q16236 605 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 RIC3Q7Z5B4 369 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 A0A1B0GUA9 196 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 ANKRD18BA2A2Z9 1011 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 CDC42BPBQ9Y5S2 1711 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 PKP1Q13835 747 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 SHPRHQ149N8 1683 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 CDK12Q9NYV4 1490 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 EBAG9O00559 213 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 SSBP05455 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-213ENST00000537002 ARHGAP25P42331 645 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 CLCN6P51797 869 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 TANGO6Q9C0B7 1094 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 CCDC113Q9H0I3 377 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 EFCAB6Q5THR3 1501 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 KIAA0232Q92628 1395 aa6.18□□□□□ -1.42
PTPRD-213ENST00000537002 MRPL50Q8N5N7 158 aaKnown RBP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 RPGRIP1Q96KN7 1286 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ATXN2Q99700 1313 aaKnown RBP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ZNF853P0CG23 659 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 HSPA4P34932 840 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 KRT32Q14532 448 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 TCEANC2Q96MN5 208 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 KCNF1Q9H3M0 494 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 FBXO3Q9UK99 471 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 NAA25Q14CX7 972 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 VIPAS39Q9H9C1 493 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ARHGEF10O15013 1369 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 MAP2K1Q02750 393 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 MSL1Q68DK7 614 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 SULT6B1Q6IMI4 303 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 B4GALNT4Q76KP1 1039 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 PPP1R12AO14974 1030 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms