RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FANCCQ00597 558 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 PLAURQ03405 335 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 GRM2Q14416 872 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 VWA5B2Q8N398 1253 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 NSUN5Q96P11 429 aaKnown RBP8.59□□□□□ -1.03
PRKDC-208ENST00000536710 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
PRKDC-208ENST00000536710 HCN2Q9UL51 889 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 PRR12Q9ULL5 1215 aa8.59□□□□□ -1.03
PRKDC-208ENST00000536710 A0A1W2PP55 124 aa8.58□□□□□ -1.04
PRKDC-208ENST00000536710 VEGFBP49765 207 aa8.58□□□□□ -1.04
PRKDC-208ENST00000536710 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
PRKDC-208ENST00000536710 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
PRKDC-208ENST00000536710 HYAL2Q12891 473 aa8.58□□□□□ -1.04
PRKDC-208ENST00000536710 DHX32Q7L7V1 743 aaKnown RBP8.58□□□□□ -1.04
PRKDC-208ENST00000536710 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
PRKDC-208ENST00000536710 IGSF3O75054 1194 aa8.57□□□□□ -1.04
PRKDC-208ENST00000536710 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
PRKDC-208ENST00000536710 MEI1Q5TIA1 1274 aa8.57□□□□□ -1.04
PRKDC-208ENST00000536710 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
PRKDC-208ENST00000536710 SPACA7Q96KW9 195 aa8.57□□□□□ -1.04
PRKDC-208ENST00000536710 SALL4Q9UJQ4 1053 aa8.57□□□□□ -1.04
PRKDC-208ENST00000536710 MAP3K6O95382 1288 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 GSTT1P30711 240 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 SOX18P35713 384 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 CTBSQ01459 385 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
PRKDC-208ENST00000536710 TAF1CQ15572 869 aaPredicted RBP8.56□□□□□ -1.04
PRKDC-208ENST00000536710 COL13A1Q5TAT6 717 aaPredicted RBP8.56□□□□□ -1.04
PRKDC-208ENST00000536710 KIAA0319Q5VV43 1072 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
PRKDC-208ENST00000536710 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
PRKDC-208ENST00000536710 CCSER2Q9H7U1 834 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
PRKDC-208ENST00000536710 BMP4P12644 408 aa8.55□□□□□ -1.04
PRKDC-208ENST00000536710 FCGRTP55899 365 aa8.55□□□□□ -1.04
PRKDC-208ENST00000536710 FAM182BQ5T319 152 aa8.55□□□□□ -1.04
PRKDC-208ENST00000536710 OSMRQ99650 979 aa8.55□□□□□ -1.04
PRKDC-208ENST00000536710 TTF2Q9UNY4 1162 aaKnown RBP8.55□□□□□ -1.04
PRKDC-208ENST00000536710 ACPPP15309 386 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 NAALADL2Q58DX5 795 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 HS2ST1Q7LGA3 356 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 UBE2OQ9C0C9 1292 aaKnown RBP8.54□□□□□ -1.04
PRKDC-208ENST00000536710 GGT7Q9UJ14 662 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 AKAP2Q9Y2D5 859 aa8.54□□□□□ -1.04
PRKDC-208ENST00000536710 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 TRPA1O75762 1119 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 KIF4AO95239 1232 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 NRLP54845 237 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 RAD51AP2Q09MP3 1159 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 SYT9Q86SS6 491 aa8.53□□□□□ -1.04
PRKDC-208ENST00000536710 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
PRKDC-208ENST00000536710 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.05
PRKDC-208ENST00000536710 J3QW42 95 aa8.52□□□□□ -1.05
PRKDC-208ENST00000536710 SIK1P57059 783 aa8.52□□□□□ -1.05
PRKDC-208ENST00000536710 PCBP4P57723 403 aaKnown RBP8.52□□□□□ -1.05
PRKDC-208ENST00000536710 GLIS3Q8NEA6 775 aa8.52□□□□□ -1.05
PRKDC-208ENST00000536710 TGIF2Q9GZN2 237 aa8.52□□□□□ -1.05
PRKDC-208ENST00000536710 GHRHP01286 108 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 MX2P20592 715 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 ST13P50502 369 aaKnown RBP8.51□□□□□ -1.05
PRKDC-208ENST00000536710 GPLD1P80108 840 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 ZNF394Q53GI3 561 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 USP48Q86UV5 1035 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 CEP120Q8N960 986 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 ASAP3Q8TDY4 903 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 DNAJB12Q9NXW2 375 aaKnown RBP8.51□□□□□ -1.05
PRKDC-208ENST00000536710 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
PRKDC-208ENST00000536710 PCDHGB7Q9Y5F8 929 aa8.51□□□□□ -1.05
PRKDC-208ENST00000536710 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 ZBTB42B2RXF5 422 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 HOXD8P13378 290 aaPredicted RBP8.5□□□□□ -1.05
PRKDC-208ENST00000536710 EIF2AK2P19525 551 aaKnown RBP8.5□□□□□ -1.05
PRKDC-208ENST00000536710 PCSK7Q16549 785 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 ZNF468Q5VIY5 522 aaPredicted RBP8.5□□□□□ -1.05
PRKDC-208ENST00000536710 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
PRKDC-208ENST00000536710 TRPM4Q8TD43 1214 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 CNTNAP3BQ96NU0 1288 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 TCF12Q99081 682 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 CNTNAP3Q9BZ76 1288 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 ACBD3Q9H3P7 528 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 CAPN10Q9HC96 672 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 ABCB6Q9NP58 842 aa8.5□□□□□ -1.05
PRKDC-208ENST00000536710 PPP1R1BQ9UD71 204 aaPredicted RBP8.5□□□□□ -1.05
PRKDC-208ENST00000536710 POTECB2RU33 542 aa8.49□□□□□ -1.05
PRKDC-208ENST00000536710 C2CD2LO14523 706 aa8.49□□□□□ -1.05
PRKDC-208ENST00000536710 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
PRKDC-208ENST00000536710 ATP11AP98196 1134 aa8.49□□□□□ -1.05
PRKDC-208ENST00000536710 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
PRKDC-208ENST00000536710 CCNJLQ8IV13 435 aa8.49□□□□□ -1.05
PRKDC-208ENST00000536710 MICALL1Q8N3F8 863 aa8.49□□□□□ -1.05
PRKDC-208ENST00000536710 C3orf58Q8NDZ4 430 aa8.49□□□□□ -1.05
PRKDC-208ENST00000536710 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms