RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 MARF1Q9Y4F3 1742 aaKnown RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 ALDH1L1O75891 902 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 SASH3O75995 380 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 TBC1D8O95759 1140 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 FAM160A1Q05DH4 1040 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 FCHSD1Q86WN1 690 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 ERC1Q8IUD2 1116 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 REXO1L1PQ8IX06 675 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 FMR1NBQ8N0W7 255 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 CLASRPQ8N2M8 674 aaKnown RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 TXLNBQ8N3L3 684 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 AOPEPQ8N6M6 819 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 DNAAF4Q8WXU2 420 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 SRRTQ9BXP5 876 aaKnown RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 EFCC1Q9HA90 598 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-215ENST00000536145 SALL1Q9NSC2 1324 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 A0A1W2PQ27 194 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 A0A1W2PQ64 194 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 A0A1W2PQD8 194 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 NUTM2FA1L443 756 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 PFKFB2O60825 505 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 TAF5LO75529 589 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 SASH1O94885 1247 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 CTDNEP1O95476 244 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 NOP2P46087 812 aaKnown RBP8.09□□□□□ -1.11
CPSF7-215ENST00000536145 EIF4A1P60842 406 aaKnown RBP8.09□□□□□ -1.11
CPSF7-215ENST00000536145 TPM4P67936 248 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 NUTM2GQ5VZR2 741 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 RSRC2Q7L4I2 434 aaKnown RBP8.09□□□□□ -1.11
CPSF7-215ENST00000536145 ILDR1Q86SU0 546 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-215ENST00000536145 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 CEP57L1Q8IYX8 460 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 NSUN7Q8NE18 718 aaKnown RBP8.09□□□□□ -1.11
CPSF7-215ENST00000536145 SMARCE1Q969G3 411 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 TCEANC2Q96MN5 208 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 USP28Q96RU2 1077 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 AGXT2Q9BYV1 514 aa8.09□□□□□ -1.11
CPSF7-215ENST00000536145 ROBO2Q9HCK4 1378 aa8.09□□□□□ -1.12
CPSF7-215ENST00000536145 A0A087WWV3 80 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 EFCAB8A8MWE9 144 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 TPM1P09493 284 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 CDK11BP21127 795 aaKnown RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 ST5P78524 1137 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 PSME1Q06323 249 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 SCRN1Q12765 414 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 KRT32Q14532 448 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 HDGFL1Q5TGJ6 251 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 CC2D1AQ6P1N0 951 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 TMCO3Q6UWJ1 677 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 ZNF589Q86UQ0 364 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 TMEM139Q8IV31 216 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 MSL3Q8N5Y2 521 aaKnown RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 NEK11Q8NG66 645 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 NECTIN2Q92692 538 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 EAF2Q96CJ1 260 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 GPATCH3Q96I76 525 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 KAZALD1Q96I82 304 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 XPO4Q9C0E2 1151 aaKnown RBP8.08□□□□□ -1.12
CPSF7-215ENST00000536145 HSD3B7Q9H2F3 369 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 DNAI1Q9UI46 699 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 PARP3Q9Y6F1 533 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 ADAMTS13Q76LX8 1427 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 SLIT1O75093 1534 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
CPSF7-215ENST00000536145 BECN2A8MW95 431 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 MAP2K7O14733 419 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 CCP110O43303 1012 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 RPS6KA5O75582 802 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 SEC31AO94979 1220 aaKnown RBP8.07□□□□□ -1.12
CPSF7-215ENST00000536145 OAS2P29728 719 aaKnown RBP8.07□□□□□ -1.12
CPSF7-215ENST00000536145 NLRP12P59046 1061 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
CPSF7-215ENST00000536145 TEX35Q5T0J7 233 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 CCDC73Q6ZRK6 1079 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 FSIP1Q8NA03 581 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 ZNF396Q96N95 335 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-215ENST00000536145 FUT8Q9BYC5 575 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 TRIM34Q9BYJ4 488 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 FTOQ9C0B1 505 aaKnown RBP eCLIP8.07□□□□□ -1.12
CPSF7-215ENST00000536145 ARGLU1Q9NWB6 273 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-215ENST00000536145 RTEL1Q9NZ71 1219 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 IFNKQ9P0W0 207 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 HEG1Q9ULI3 1381 aa8.07□□□□□ -1.12
CPSF7-215ENST00000536145 LMO7Q8WWI1 1683 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 PI4KAP2A4QPH2 592 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 VWA3AA6NCI4 1184 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms