RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
DDB1-207ENST00000535967 BEND3Q5T5X7 828 aa16.04■□□□□ 0.16
DDB1-207ENST00000535967 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
DDB1-207ENST00000535967 HACL1Q9UJ83 578 aa16.04■□□□□ 0.16
DDB1-207ENST00000535967 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
DDB1-207ENST00000535967 TMEM88BA6NKF7 163 aa16.03■□□□□ 0.16
DDB1-207ENST00000535967 FZD9O00144 591 aa16.03■□□□□ 0.16
DDB1-207ENST00000535967 EPHX2P34913 555 aa16.03■□□□□ 0.16
DDB1-207ENST00000535967 IARSP41252 1262 aaKnown RBP16.03■□□□□ 0.16
DDB1-207ENST00000535967 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
DDB1-207ENST00000535967 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
DDB1-207ENST00000535967 TAF1P21675 1872 aa16.03■□□□□ 0.16
DDB1-207ENST00000535967 BCAR3O75815 825 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.16
DDB1-207ENST00000535967 PYGBP11216 843 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 GCKRQ14397 625 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 SLC4A10Q6U841 1118 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 ABCC4O15439 1325 aa16.02■□□□□ 0.16
DDB1-207ENST00000535967 RTKN2Q8IZC4 609 aa16.02■□□□□ 0.15
DDB1-207ENST00000535967 FAM89AQ96GI7 184 aa16.02■□□□□ 0.15
DDB1-207ENST00000535967 NLRP3Q96P20 1036 aa16.02■□□□□ 0.15
DDB1-207ENST00000535967 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■■■□ 26.5
DDB1-207ENST00000535967 ATF7IPQ6VMQ6 1270 aa16.01■□□□□ 0.15
DDB1-207ENST00000535967 PHF12Q96QT6 1004 aa16.01■□□□□ 0.15
DDB1-207ENST00000535967 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
DDB1-207ENST00000535967 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
DDB1-207ENST00000535967 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
DDB1-207ENST00000535967 H7C1W4 665 aa16■□□□□ 0.15
DDB1-207ENST00000535967 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
DDB1-207ENST00000535967 CCT4P50991 539 aaKnown RBP16■□□□□ 0.15
DDB1-207ENST00000535967 LBX1P52954 281 aa16■□□□□ 0.15
DDB1-207ENST00000535967 ZKSCAN2Q63HK3 967 aa16■□□□□ 0.15
DDB1-207ENST00000535967 CNTROBQ8N137 903 aa16■□□□□ 0.15
DDB1-207ENST00000535967 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
DDB1-207ENST00000535967 A0A1B0GUL6 1792 aa15.99■□□□□ 0.15
DDB1-207ENST00000535967 RASSF10A6NK89 507 aa15.99■□□□□ 0.15
DDB1-207ENST00000535967 GRM8O00222 908 aa15.99■□□□□ 0.15
DDB1-207ENST00000535967 TRIM27P14373 513 aa15.99■□□□□ 0.15
DDB1-207ENST00000535967 CTCFP49711 727 aaPredicted RBP15.99■□□□□ 0.15
DDB1-207ENST00000535967 UBE3BQ7Z3V4 1068 aa15.99■□□□□ 0.15
DDB1-207ENST00000535967 GPC2Q8N158 579 aa15.99■□□□□ 0.15
DDB1-207ENST00000535967 RPGRQ92834 1020 aaKnown RBP15.99■□□□□ 0.15
DDB1-207ENST00000535967 PDE8AO60658 829 aa15.98■□□□□ 0.15
DDB1-207ENST00000535967 HCLS1P14317 486 aaPredicted RBP15.98■□□□□ 0.15
DDB1-207ENST00000535967 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
DDB1-207ENST00000535967 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
DDB1-207ENST00000535967 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
DDB1-207ENST00000535967 PSMD1Q99460 953 aa15.98■□□□□ 0.15
DDB1-207ENST00000535967 UTYO14607 1347 aa15.98■□□□□ 0.15
DDB1-207ENST00000535967 HSPA8P11142 646 aaKnown RBP15.97■□□□□ 0.15
DDB1-207ENST00000535967 CASP7P55210 303 aa15.97■□□□□ 0.15
DDB1-207ENST00000535967 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
DDB1-207ENST00000535967 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
DDB1-207ENST00000535967 PNMA8AQ86V59 439 aaPredicted RBP15.97■□□□□ 0.15
DDB1-207ENST00000535967 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
DDB1-207ENST00000535967 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
DDB1-207ENST00000535967 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
DDB1-207ENST00000535967 GJA3Q9Y6H8 435 aa15.97■□□□□ 0.15
DDB1-207ENST00000535967 TRPM7Q96QT4 1865 aa15.97■□□□□ 0.15
DDB1-207ENST00000535967 THSD7BQ9C0I4 1608 aa15.96■□□□□ 0.15
DDB1-207ENST00000535967 RTL9Q8NET4 1388 aa15.96■□□□□ 0.15
DDB1-207ENST00000535967 EPS15P42566 896 aa15.96■□□□□ 0.15
DDB1-207ENST00000535967 SCNN1DP51172 638 aa15.96■□□□□ 0.15
DDB1-207ENST00000535967 DEFB115Q30KQ5 88 aa15.96■□□□□ 0.15
DDB1-207ENST00000535967 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
DDB1-207ENST00000535967 RBM17Q96I25 401 aaKnown RBP15.96■□□□□ 0.15
DDB1-207ENST00000535967 CRAMP1Q96RY5 1269 aa15.96■□□□□ 0.15
DDB1-207ENST00000535967 WDR33Q9C0J8 1336 aaKnown RBP15.95■□□□□ 0.14
DDB1-207ENST00000535967 MS4A1P11836 297 aa15.95■□□□□ 0.14
DDB1-207ENST00000535967 CTSWP56202 376 aa15.95■□□□□ 0.14
DDB1-207ENST00000535967 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
DDB1-207ENST00000535967 JDP2Q8WYK2 163 aa15.95■□□□□ 0.14
DDB1-207ENST00000535967 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
DDB1-207ENST00000535967 FTSJ3Q8IY81 847 aaKnown RBP15.94■□□□□ 0.14
DDB1-207ENST00000535967 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
DDB1-207ENST00000535967 ABT1Q9ULW3 272 aaKnown RBP15.94■□□□□ 0.14
DDB1-207ENST00000535967 COL4A1P02462 1669 aa15.94■□□□□ 0.14
DDB1-207ENST00000535967 TRAF5O00463 557 aa15.94■□□□□ 0.14
DDB1-207ENST00000535967 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
DDB1-207ENST00000535967 DZIP1LQ8IYY4 767 aaKnown RBP15.94■□□□□ 0.14
DDB1-207ENST00000535967 EIF6P56537 245 aaKnown RBP15.93■□□□□ 0.14
DDB1-207ENST00000535967 LARGE2Q8N3Y3 721 aa15.93■□□□□ 0.14
DDB1-207ENST00000535967 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
DDB1-207ENST00000535967 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
DDB1-207ENST00000535967 GRAPQ13588 217 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 CST9Q5W186 159 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 CC2D2BQ6DHV5 1058 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 TMC4Q7Z404 712 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 TTLL11Q8NHH1 800 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 GRAPLQ8TC17 118 aaPredicted RBP15.92■□□□□ 0.14
DDB1-207ENST00000535967 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 ABHD8Q96I13 439 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 HDAC5Q9UQL6 1122 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 TNNQ9UQP3 1299 aa15.92■□□□□ 0.14
DDB1-207ENST00000535967 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
DDB1-207ENST00000535967 CYP4F22Q6NT55 531 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms