RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 TRMT112Q9UI30 125 aaKnown RBP11.8□□□□□ -0.52
UBB-204ENST00000535788 LAMB2P55268 1798 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
UBB-204ENST00000535788 ALDH1B1P30837 517 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 SOX10P56693 466 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 PNMA8AQ86V59 439 aaPredicted RBP11.79□□□□□ -0.52
UBB-204ENST00000535788 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 NLRP3Q96P20 1036 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 ISCA1Q9BUE6 129 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 STK31Q9BXU1 1019 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 SCN4AP35499 1836 aa11.79□□□□□ -0.52
UBB-204ENST00000535788 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
UBB-204ENST00000535788 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
UBB-204ENST00000535788 ANAPC15P60006 121 aa11.78□□□□□ -0.52
UBB-204ENST00000535788 SLC10A5Q5PT55 438 aa11.78□□□□□ -0.52
UBB-204ENST00000535788 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
UBB-204ENST00000535788 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
UBB-204ENST00000535788 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.52
UBB-204ENST00000535788 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.53
UBB-204ENST00000535788 MCCP23508 829 aa11.77□□□□□ -0.53
UBB-204ENST00000535788 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.53
UBB-204ENST00000535788 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
UBB-204ENST00000535788 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
UBB-204ENST00000535788 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.53
UBB-204ENST00000535788 MYD88Q99836 296 aa11.77□□□□□ -0.53
UBB-204ENST00000535788 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.53
UBB-204ENST00000535788 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.53
UBB-204ENST00000535788 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 PPEF1O14829 653 aaPredicted RBP11.76□□□□□ -0.53
UBB-204ENST00000535788 KDM4AO75164 1064 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
UBB-204ENST00000535788 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
UBB-204ENST00000535788 PRPF38BQ5VTL8 546 aaKnown RBP11.76□□□□□ -0.53
UBB-204ENST00000535788 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 MAP3K2Q9Y2U5 619 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 ABCC4O15439 1325 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 ZNF521Q96K83 1311 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 SNED1Q8TER0 1413 aa11.76□□□□□ -0.53
UBB-204ENST00000535788 TRAF5O00463 557 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 MAP2K2P36507 400 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
UBB-204ENST00000535788 CST9Q5W186 159 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 G2E3Q7L622 706 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 SLC51AQ86UW1 340 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 EXOC8Q8IYI6 725 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
UBB-204ENST00000535788 METTL22Q9BUU2 404 aaPredicted RBP11.75□□□□□ -0.53
UBB-204ENST00000535788 PI4KAP2A4QPH2 592 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 VAMP4O75379 141 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 KSR2Q6VAB6 950 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 ANKRD13AQ8IZ07 590 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 PI4KAP1Q8N8J0 262 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 CWC25Q9NXE8 425 aaPredicted RBP11.74□□□□□ -0.53
UBB-204ENST00000535788 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
UBB-204ENST00000535788 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
UBB-204ENST00000535788 CA12O43570 354 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 FLIIQ13045 1269 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
UBB-204ENST00000535788 ZBTB38Q8NAP3 1195 aaPredicted RBP11.73□□□□□ -0.53
UBB-204ENST00000535788 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 ANP32EQ9BTT0 268 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 TLL2Q9Y6L7 1015 aa11.73□□□□□ -0.53
UBB-204ENST00000535788 TAF1P21675 1872 aa11.72□□□□□ -0.53
UBB-204ENST00000535788 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
UBB-204ENST00000535788 NEXNQ0ZGT2 675 aa11.72□□□□□ -0.53
UBB-204ENST00000535788 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
UBB-204ENST00000535788 GRAPQ13588 217 aa11.72□□□□□ -0.53
UBB-204ENST00000535788 CIAPIN1Q6FI81 312 aa11.72□□□□□ -0.53
UBB-204ENST00000535788 PIAS4Q8N2W9 510 aaPredicted RBP11.72□□□□□ -0.53
UBB-204ENST00000535788 GRAPLQ8TC17 118 aaPredicted RBP11.72□□□□□ -0.53
UBB-204ENST00000535788 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
UBB-204ENST00000535788 TMX4Q9H1E5 349 aaPredicted RBP11.72□□□□□ -0.53
UBB-204ENST00000535788 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
UBB-204ENST00000535788 BBOX1O75936 387 aa11.71□□□□□ -0.53
UBB-204ENST00000535788 PCCAP05165 728 aaPredicted RBP11.71□□□□□ -0.53
UBB-204ENST00000535788 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
UBB-204ENST00000535788 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
UBB-204ENST00000535788 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
UBB-204ENST00000535788 CWF19L2Q2TBE0 894 aaKnown RBP11.71□□□□□ -0.53
UBB-204ENST00000535788 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
UBB-204ENST00000535788 GPC2Q8N158 579 aa11.71□□□□□ -0.53
UBB-204ENST00000535788 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
UBB-204ENST00000535788 ADAMTSL1Q8N6G6 1762 aa11.71□□□□□ -0.54
UBB-204ENST00000535788 COL4A1P02462 1669 aa11.71□□□□□ -0.54
UBB-204ENST00000535788 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
UBB-204ENST00000535788 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
UBB-204ENST00000535788 FZD9O00144 591 aa11.7□□□□□ -0.54
UBB-204ENST00000535788 EPS15P42566 896 aa11.7□□□□□ -0.54
UBB-204ENST00000535788 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms