RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SPEF2Q9C093 1822 aa24.11■■□□□ 1.45
LRRK1-210ENST00000534045 H7C1D1 291 aa24.1■■□□□ 1.45
LRRK1-210ENST00000534045 SLC4A10Q6U841 1118 aa24.1■■□□□ 1.45
LRRK1-210ENST00000534045 XDHP47989 1333 aa24.1■■□□□ 1.45
LRRK1-210ENST00000534045 CCER2I3L3R5 266 aa24.09■■□□□ 1.45
LRRK1-210ENST00000534045 ECE2O60344 883 aa24.09■■□□□ 1.45
LRRK1-210ENST00000534045 ITGBL1O95965 494 aaPredicted RBP24.09■■□□□ 1.45
LRRK1-210ENST00000534045 ATP2B4P23634 1241 aa24.09■■□□□ 1.45
LRRK1-210ENST00000534045 MPHOSPH8Q99549 860 aa24.09■■□□□ 1.45
LRRK1-210ENST00000534045 BSDC1Q9NW68 430 aaPredicted RBP24.09■■□□□ 1.45
LRRK1-210ENST00000534045 ZNF521Q96K83 1311 aa24.09■■□□□ 1.45
LRRK1-210ENST00000534045 TMEM88BA6NKF7 163 aa24.08■■□□□ 1.45
LRRK1-210ENST00000534045 YDJCA8MPS7 323 aa24.08■■□□□ 1.45
LRRK1-210ENST00000534045 GPR101Q96P66 508 aaPredicted RBP24.08■■□□□ 1.45
LRRK1-210ENST00000534045 CNOT7Q9UIV1 285 aaKnown RBP24.08■■□□□ 1.45
LRRK1-210ENST00000534045 PLA2G12BQ9BX93 195 aa24.07■■□□□ 1.44
LRRK1-210ENST00000534045 C9orf78Q9NZ63 289 aaPredicted RBP24.07■■□□□ 1.44
LRRK1-210ENST00000534045 CHMP3Q9Y3E7 222 aa24.07■■□□□ 1.44
LRRK1-210ENST00000534045 PASKQ96RG2 1323 aa24.07■■□□□ 1.44
LRRK1-210ENST00000534045 PSMD14O00487 310 aa24.06■■□□□ 1.44
LRRK1-210ENST00000534045 ITGA6P23229 1130 aa24.06■■□□□ 1.44
LRRK1-210ENST00000534045 BEND3Q5T5X7 828 aa24.06■■□□□ 1.44
LRRK1-210ENST00000534045 MKRN1Q9UHC7 482 aaKnown RBP24.06■■□□□ 1.44
LRRK1-210ENST00000534045 ZBTB12Q9Y330 459 aaPredicted RBP24.06■■□□□ 1.44
LRRK1-210ENST00000534045 DUOX1Q9NRD9 1551 aa24.05■■□□□ 1.44
LRRK1-210ENST00000534045 JMYQ8N9B5 988 aa24.05■■□□□ 1.44
LRRK1-210ENST00000534045 DPF2Q92785 391 aa24.05■■□□□ 1.44
LRRK1-210ENST00000534045 MINPP1Q9UNW1 487 aa24.05■■□□□ 1.44
LRRK1-210ENST00000534045 COL4A1P02462 1669 aa24.05■■□□□ 1.44
LRRK1-210ENST00000534045 ANKRD18BA2A2Z9 1011 aa24.04■■□□□ 1.44
LRRK1-210ENST00000534045 SRCIN1Q9C0H9 1055 aa24.04■■□□□ 1.44
LRRK1-210ENST00000534045 LTBP1Q14766 1721 aa24.04■■□□□ 1.44
LRRK1-210ENST00000534045 RTL9Q8NET4 1388 aa24.03■■□□□ 1.44
LRRK1-210ENST00000534045 CSF1RP07333 972 aa24.03■■□□□ 1.44
LRRK1-210ENST00000534045 RPS12P25398 132 aaKnown RBP24.03■■□□□ 1.44
LRRK1-210ENST00000534045 SLFN5Q08AF3 891 aa24.03■■□□□ 1.44
LRRK1-210ENST00000534045 MICALL2Q8IY33 904 aa24.03■■□□□ 1.44
LRRK1-210ENST00000534045 ANKRD2Q9GZV1 360 aa24.03■■□□□ 1.44
LRRK1-210ENST00000534045 GRM8O00222 908 aa24.02■■□□□ 1.44
LRRK1-210ENST00000534045 ALDH1L1O75891 902 aa24.02■■□□□ 1.44
LRRK1-210ENST00000534045 CASP7P55210 303 aa24.02■■□□□ 1.44
LRRK1-210ENST00000534045 IFIT5Q13325 482 aaKnown RBP24.02■■□□□ 1.44
LRRK1-210ENST00000534045 FAM161AQ3B820 660 aa24.02■■□□□ 1.44
LRRK1-210ENST00000534045 KCNQ5Q9NR82 932 aa24.02■■□□□ 1.44
LRRK1-210ENST00000534045 KCNJ4P48050 445 aa24.01■■□□□ 1.43
LRRK1-210ENST00000534045 CCT4P50991 539 aaKnown RBP24.01■■□□□ 1.43
LRRK1-210ENST00000534045 TAF7LQ5H9L4 462 aa24.01■■□□□ 1.43
LRRK1-210ENST00000534045 RBM26Q5T8P6 1007 aaKnown RBP24.01■■□□□ 1.43
LRRK1-210ENST00000534045 ZC3H15Q8WU90 426 aaKnown RBP24.01■■□□□ 1.43
LRRK1-210ENST00000534045 ABT1Q9ULW3 272 aaKnown RBP24.01■■□□□ 1.43
LRRK1-210ENST00000534045 ADAMTSL1Q8N6G6 1762 aa24.01■■□□□ 1.43
LRRK1-210ENST00000534045 PODNQ7Z5L7 613 aa24■■□□□ 1.43
LRRK1-210ENST00000534045 LEMD3Q9Y2U8 911 aa24■■□□□ 1.43
LRRK1-210ENST00000534045 CCDC57Q2TAC2 916 aa23.99■■□□□ 1.43
LRRK1-210ENST00000534045 MRPL50Q8N5N7 158 aaKnown RBP23.99■■□□□ 1.43
LRRK1-210ENST00000534045 VIL1P09327 827 aaKnown RBP23.98■■□□□ 1.43
LRRK1-210ENST00000534045 LMBR1LQ6UX01 489 aa23.98■■□□□ 1.43
LRRK1-210ENST00000534045 CDCA7LQ96GN5 454 aa23.98■■□□□ 1.43
LRRK1-210ENST00000534045 PTPRCP08575 1304 aa23.97■■□□□ 1.43
LRRK1-210ENST00000534045 FOXO4P98177 505 aa23.97■■□□□ 1.43
LRRK1-210ENST00000534045 DEFB115Q30KQ5 88 aa23.97■■□□□ 1.43
LRRK1-210ENST00000534045 TBC1D10BQ4KMP7 808 aaPredicted RBP23.97■■□□□ 1.43
LRRK1-210ENST00000534045 CDC37L1Q7L3B6 337 aa23.97■■□□□ 1.43
LRRK1-210ENST00000534045 SAMD7Q7Z3H4 446 aa23.97■■□□□ 1.43
LRRK1-210ENST00000534045 ZNF804BA4D1E1 1349 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 SHTN1A0MZ66 631 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 USP17L3A6NCW0 530 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 USP17L4A6NCW7 530 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 TRAF5O00463 557 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 PAXIP1Q6ZW49 1069 aaPredicted RBP23.96■■□□□ 1.43
LRRK1-210ENST00000534045 USP17L1Q7RTZ2 530 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 TRPM4Q8TD43 1214 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 SSH1Q8WYL5 1049 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 FBXW7Q969H0 707 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 PGAP2Q9UHJ9 254 aa23.96■■□□□ 1.43
LRRK1-210ENST00000534045 HIRAP54198 1017 aaPredicted RBP23.95■■□□□ 1.42
LRRK1-210ENST00000534045 CHRNDQ07001 517 aa23.95■■□□□ 1.42
LRRK1-210ENST00000534045 RSBN1LQ6PCB5 846 aaPredicted RBP23.95■■□□□ 1.42
LRRK1-210ENST00000534045 AGBL3Q8NEM8 1001 aa23.95■■□□□ 1.42
LRRK1-210ENST00000534045 DCPSQ96C86 337 aaKnown RBP23.95■■□□□ 1.42
LRRK1-210ENST00000534045 SMC4Q9NTJ3 1288 aa23.95■■□□□ 1.42
LRRK1-210ENST00000534045 CNTNAP1P78357 1384 aa23.94■■□□□ 1.42
LRRK1-210ENST00000534045 MED23Q9ULK4 1368 aa23.94■■□□□ 1.42
LRRK1-210ENST00000534045 ALDH1L2Q3SY69 923 aa23.94■■□□□ 1.42
LRRK1-210ENST00000534045 GLIS2Q9BZE0 524 aaPredicted RBP23.94■■□□□ 1.42
LRRK1-210ENST00000534045 COA1Q9GZY4 146 aa23.94■■□□□ 1.42
LRRK1-210ENST00000534045 CNNM1Q9NRU3 951 aa23.94■■□□□ 1.42
LRRK1-210ENST00000534045 WTIPA6NIX2 430 aaPredicted RBP23.93■■□□□ 1.42
LRRK1-210ENST00000534045 FMR1Q06787 632 aaKnown RBP eCLIP23.93■■□□□ 1.42
LRRK1-210ENST00000534045 LDHAL6AQ6ZMR3 332 aa23.93■■□□□ 1.42
LRRK1-210ENST00000534045 ZNF408Q9H9D4 720 aa23.93■■□□□ 1.42
LRRK1-210ENST00000534045 PSME4Q14997 1843 aa23.93■■□□□ 1.42
LRRK1-210ENST00000534045 CELF2O95319 508 aaKnown RBP23.92■■□□□ 1.42
LRRK1-210ENST00000534045 VEGFBP49765 207 aa23.92■■□□□ 1.42
LRRK1-210ENST00000534045 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
LRRK1-210ENST00000534045 USP48Q86UV5 1035 aa23.92■■□□□ 1.42
LRRK1-210ENST00000534045 RASSF10A6NK89 507 aa23.91■■□□□ 1.42
LRRK1-210ENST00000534045 PLIN1O60240 522 aa23.91■■□□□ 1.42
LRRK1-210ENST00000534045 CT47B1P0C2W7 299 aaPredicted RBP23.91■■□□□ 1.42
LRRK1-210ENST00000534045 USP17L8P0C7I0 530 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms