RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 FERMT3Q86UX7 667 aa4.64□□□□□ -1.67
SOX6-217ENST00000533870 HNRNPLLQ8WVV9 542 aaKnown RBP4.64□□□□□ -1.67
SOX6-217ENST00000533870 NEURL4Q96JN8 1562 aa4.64□□□□□ -1.67
SOX6-217ENST00000533870 RAPGEF6Q8TEU7 1601 aa4.64□□□□□ -1.67
SOX6-217ENST00000533870 WDR19Q8NEZ3 1342 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 TACC1O75410 805 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 EZRP15311 586 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 CMA1P23946 247 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 EVCP57679 992 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CCDC181Q5TID7 509 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CCDC12Q8WUD4 166 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 ZNF274Q96GC6 653 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 NSRP1Q9H0G5 558 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 ZSWIM6Q9HCJ5 1215 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 BMP2KQ9NSY1 1161 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 LRRFIP2Q9Y608 721 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 PLXNC1O60486 1568 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 UQCRFS1P1P0C7P4 283 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 LMAN1P49257 510 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 TMC6Q7Z403 805 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 NCAPGQ9BPX3 1015 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RAB34Q9BZG1 259 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RBM8AQ9Y5S9 174 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 CUTAO60888 179 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 MYL1P05976 194 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CALM1P0DP23 149 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CALM2P0DP24 149 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CALM3P0DP25 149 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 GBP1P32455 592 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 GTF2A1P52655 376 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 NLRP6P59044 892 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RUFY4Q6ZNE9 571 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 MMS22LQ6ZRQ5 1243 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RUFY3Q7L099 469 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 PPP1R42Q7Z4L9 355 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 APLFQ8IW19 511 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 ZGPATQ8N5A5 531 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 TEX13AQ9BXU3 409 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 ORC3Q9UBD5 711 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 CEP170Q5SW79 1584 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 ZSCAN20P17040 1043 aaPredicted RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 IL13P35225 146 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 ZSCAN26Q16670 478 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 TMEM132EQ6IEE7 984 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RETREG2Q8NC44 543 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CCHCR1Q8TD31 782 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 MEIS3Q99687 375 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 DSCC1Q9BVC3 393 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 TRPM2O94759 1503 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 HMOX1P09601 288 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 NF2P35240 595 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 IFFO1Q0D2I5 559 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 TRAF1Q13077 416 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RRS1Q15050 365 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 HSP90AB3PQ58FF7 597 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 ICE2Q659A1 982 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RBM43Q6ZSC3 357 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 NCOA7Q8NI08 942 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 TMEM87BQ96K49 555 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 NUP58Q9BVL2 599 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 MAGEF1Q9HAY2 307 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CDC23Q9UJX2 597 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 PFKFB2O60825 505 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 IARSP41252 1262 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 PPP2R3AQ06190 1150 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 NBPF9Q3BBW0 867 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 GIMAP6Q6P9H5 292 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 CEP128Q6ZU80 1094 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 FAM76AQ8TAV0 307 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 MAP4K1Q92918 833 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 RBM42Q9BTD8 480 aaKnown RBP4.63□□□□□ -1.67
SOX6-217ENST00000533870 C1orf115Q9H7X2 142 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 POLR3EQ9NVU0 708 aa4.63□□□□□ -1.67
SOX6-217ENST00000533870 LAMC1P11047 1609 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 SLC8A1P32418 973 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 CYP2C19P33261 490 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 SYKP43405 635 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 GNAQP50148 359 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 MNAT1P51948 309 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 AMPD3Q01432 767 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 ZNF530Q6P9A1 599 aaPredicted RBP4.62□□□□□ -1.67
SOX6-217ENST00000533870 C3orf20Q8ND61 904 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 DNAJC25Q9H1X3 360 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 CBX8Q9HC52 389 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 CNPY2Q9Y2B0 182 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 TCP1P17987 556 aaKnown RBP4.62□□□□□ -1.67
SOX6-217ENST00000533870 UBASH3AP57075 661 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 MTMR3Q13615 1198 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 ARHGAP27Q6ZUM4 889 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 TTC6Q86TZ1 520 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 CCDC84Q86UT8 332 aaPredicted RBP4.62□□□□□ -1.67
SOX6-217ENST00000533870 PDILTQ8N807 584 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 KCNB2Q92953 911 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 NAP1L4Q99733 375 aaKnown RBP4.62□□□□□ -1.67
SOX6-217ENST00000533870 A0A1W2PP64 1363 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 ATP7BP35670 1465 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 CCDC172P0C7W6 258 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 TNNC1P63316 161 aa4.62□□□□□ -1.67
SOX6-217ENST00000533870 DNM1Q05193 864 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms