RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 PRPF40BQ6NWY9 871 aaKnown RBP8.61□□□□□ -1.03
RNPC3-209ENST00000533834 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
RNPC3-209ENST00000533834 BTAF1O14981 1849 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 RESTQ13127 1097 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 SEC62Q99442 399 aaKnown RBP8.6□□□□□ -1.03
RNPC3-209ENST00000533834 ZMYM1Q5SVZ6 1142 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 VSIG10Q8N0Z9 540 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
RNPC3-209ENST00000533834 CDHR2Q9BYE9 1310 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 SYCE3A1L190 88 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 CDC37L1Q7L3B6 337 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
RNPC3-209ENST00000533834 TACC3Q9Y6A5 838 aa8.6□□□□□ -1.03
RNPC3-209ENST00000533834 DTNBO60941 627 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 MBD3O95983 291 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 GJB2P29033 226 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 GTF3C6Q969F1 213 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 ZNF512BQ96KM6 892 aaPredicted RBP8.59□□□□□ -1.03
RNPC3-209ENST00000533834 NDUFB9Q9Y6M9 179 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 COL1A1P02452 1464 aaPredicted RBP8.59□□□□□ -1.03
RNPC3-209ENST00000533834 MYL6BP14649 208 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 TTC6Q86TZ1 520 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 GDPD2Q9HCC8 539 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
RNPC3-209ENST00000533834 DUOX1Q9NRD9 1551 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
RNPC3-209ENST00000533834 LRRC24Q50LG9 513 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
RNPC3-209ENST00000533834 TCRBV5S4A2TA0A5A2 114 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 MCCP23508 829 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 PGBD1Q96JS3 809 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 PDRG1Q9NUG6 133 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 MAST3O60307 1309 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 ZNF335Q9H4Z2 1342 aaPredicted RBP8.58□□□□□ -1.04
RNPC3-209ENST00000533834 C14orf37Q86TY3 774 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 CCDC191Q8NCU4 936 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 RAPGEF4Q8WZA2 1011 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
RNPC3-209ENST00000533834 ZSCAN31Q96LW9 406 aaPredicted RBP8.58□□□□□ -1.04
RNPC3-209ENST00000533834 JAKMIP1Q96N16 626 aaKnown RBP8.58□□□□□ -1.04
RNPC3-209ENST00000533834 QSER1Q2KHR3 1735 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 M0R2C6 588 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 HIP1O00291 1037 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 A1BGP04217 495 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 FDPSP14324 419 aaKnown RBP8.58□□□□□ -1.04
RNPC3-209ENST00000533834 UBE2HP62256 183 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 SCARF1Q14162 830 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 UBE3BQ7Z3V4 1068 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 RGS22Q8NE09 1264 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 DSCC1Q9BVC3 393 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 RIPOR2Q9Y4F9 1068 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 MYH6P13533 1939 aa8.58□□□□□ -1.04
RNPC3-209ENST00000533834 OFD1O75665 1012 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 SCRN1Q12765 414 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 CCDC129Q6ZRS4 1044 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 PUS3Q9BZE2 481 aaKnown RBP8.57□□□□□ -1.04
RNPC3-209ENST00000533834 BOLA2Q9H3K6 86 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 UBN2Q6ZU65 1347 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 FGFR2P21802 821 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 TERF1P54274 439 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 AIMP1Q12904 312 aaKnown RBP8.57□□□□□ -1.04
RNPC3-209ENST00000533834 ZSCAN30Q86W11 494 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 ZCRB1Q8TBF4 217 aaKnown RBP8.57□□□□□ -1.04
RNPC3-209ENST00000533834 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 FBXO3Q9UK99 471 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 PFKFB2O60825 505 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 DNM1Q05193 864 aaKnown RBP8.57□□□□□ -1.04
RNPC3-209ENST00000533834 CCDC83Q8IWF9 413 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 NECAB1Q8N987 351 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 PIGBQ92521 554 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 NLRP2Q9NX02 1062 aa8.57□□□□□ -1.04
RNPC3-209ENST00000533834 RTL9Q8NET4 1388 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
RNPC3-209ENST00000533834 ANTXR2P58335 489 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
RNPC3-209ENST00000533834 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 NSUN7Q8NE18 718 aaKnown RBP8.56□□□□□ -1.04
RNPC3-209ENST00000533834 HELLSQ9NRZ9 838 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 SPTLC3Q9NUV7 552 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 SLAIN2Q9P270 581 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 UBR3Q6ZT12 1888 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
RNPC3-209ENST00000533834 ATF3P18847 181 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 LMBR1LQ6UX01 489 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 ENGASEQ8NFI3 743 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 NRXN2Q9P2S2 1712 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 IRS2Q9Y4H2 1338 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 EP400Q96L91 3159 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 ZBTB22O15209 634 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 CYP19A1P11511 503 aaPredicted RBP8.56□□□□□ -1.04
RNPC3-209ENST00000533834 SIL1Q9H173 461 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 ZKSCAN5Q9Y2L8 839 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 CYP46A1Q9Y6A2 500 aa8.56□□□□□ -1.04
RNPC3-209ENST00000533834 A0A087WZG4 1122 aa8.55□□□□□ -1.04
RNPC3-209ENST00000533834 HCLS1P14317 486 aaPredicted RBP8.55□□□□□ -1.04
RNPC3-209ENST00000533834 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms