RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 VIL1P09327 827 aaKnown RBP14.26□□□□□ -0.13
CSDE1-215ENST00000533818 CAP1Q01518 475 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 PPP1R42Q7Z4L9 355 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 POLR3GLQ9BT43 218 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
CSDE1-215ENST00000533818 CRHR2Q13324 411 aa14.25□□□□□ -0.13
CSDE1-215ENST00000533818 ARHGEF6Q15052 776 aa14.25□□□□□ -0.13
CSDE1-215ENST00000533818 SLC10A5Q5PT55 438 aa14.25□□□□□ -0.13
CSDE1-215ENST00000533818 Q7L0L9 218 aa14.25□□□□□ -0.13
CSDE1-215ENST00000533818 ARMC9Q7Z3E5 817 aa14.25□□□□□ -0.13
CSDE1-215ENST00000533818 LAMA3Q16787 3333 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 C6orf229H3BNL8 230 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
CSDE1-215ENST00000533818 COL9A1P20849 921 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 PRKG1Q13976 671 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 KIF6Q6ZMV9 814 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
CSDE1-215ENST00000533818 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 GAS2L2Q8NHY3 880 aa14.24□□□□□ -0.13
CSDE1-215ENST00000533818 NSFL1CQ9UNZ2 370 aaKnown RBP14.24□□□□□ -0.13
CSDE1-215ENST00000533818 GRAPQ13588 217 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 LDLRAD1Q5T700 205 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 GRAPLQ8TC17 118 aaPredicted RBP14.23□□□□□ -0.13
CSDE1-215ENST00000533818 NECTIN2Q92692 538 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 SLC10A4Q96EP9 437 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 ZBTB3Q9H5J0 574 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 MYOZ2Q9NPC6 264 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 MTMR10Q9NXD2 777 aa14.23□□□□□ -0.13
CSDE1-215ENST00000533818 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.23□□□□□ -0.13
CSDE1-215ENST00000533818 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
CSDE1-215ENST00000533818 OTUD7BQ6GQQ9 843 aa14.22□□□□□ -0.13
CSDE1-215ENST00000533818 TMC4Q7Z404 712 aa14.22□□□□□ -0.13
CSDE1-215ENST00000533818 SH3TC2Q8TF17 1288 aa14.22□□□□□ -0.13
CSDE1-215ENST00000533818 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
CSDE1-215ENST00000533818 STAP2Q9UGK3 403 aa14.22□□□□□ -0.13
CSDE1-215ENST00000533818 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
CSDE1-215ENST00000533818 USP17L8P0C7I0 530 aa14.21□□□□□ -0.13
CSDE1-215ENST00000533818 PARP10Q53GL7 1025 aa14.21□□□□□ -0.13
CSDE1-215ENST00000533818 AGBL3Q8NEM8 1001 aa14.21□□□□□ -0.13
CSDE1-215ENST00000533818 SHISA4Q96DD7 197 aa14.21□□□□□ -0.13
CSDE1-215ENST00000533818 EYA3Q99504 573 aa14.21□□□□□ -0.13
CSDE1-215ENST00000533818 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
CSDE1-215ENST00000533818 G3V3G9 751 aa14.2□□□□□ -0.14
CSDE1-215ENST00000533818 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
CSDE1-215ENST00000533818 RSBN1LQ6PCB5 846 aaPredicted RBP14.2□□□□□ -0.14
CSDE1-215ENST00000533818 PANK3Q9H999 370 aa14.2□□□□□ -0.14
CSDE1-215ENST00000533818 ANGEL1Q9UNK9 670 aaKnown RBP14.2□□□□□ -0.14
CSDE1-215ENST00000533818 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
CSDE1-215ENST00000533818 DUOX1Q9NRD9 1551 aa14.2□□□□□ -0.14
CSDE1-215ENST00000533818 SIPA1L3O60292 1781 aaPredicted RBP14.19□□□□□ -0.14
CSDE1-215ENST00000533818 ZBTB48P10074 688 aaPredicted RBP14.19□□□□□ -0.14
CSDE1-215ENST00000533818 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
CSDE1-215ENST00000533818 NBPF9Q3BBW0 867 aa14.19□□□□□ -0.14
CSDE1-215ENST00000533818 DIAPH1O60610 1272 aaKnown RBP14.18□□□□□ -0.14
CSDE1-215ENST00000533818 GIGYF2Q6Y7W6 1299 aaKnown RBP14.18□□□□□ -0.14
CSDE1-215ENST00000533818 UBE2Q1Q7Z7E8 422 aa14.18□□□□□ -0.14
CSDE1-215ENST00000533818 NKX2-3Q8TAU0 364 aa14.18□□□□□ -0.14
CSDE1-215ENST00000533818 WNK4Q96J92 1243 aa14.18□□□□□ -0.14
CSDE1-215ENST00000533818 ZC3H12CQ9C0D7 883 aaKnown RBP14.18□□□□□ -0.14
CSDE1-215ENST00000533818 VCANP13611 3396 aa14.17□□□□□ -0.14
CSDE1-215ENST00000533818 EVI5O60447 810 aa14.17□□□□□ -0.14
CSDE1-215ENST00000533818 GPSM2P81274 684 aa14.17□□□□□ -0.14
CSDE1-215ENST00000533818 GMLQ99445 158 aa14.17□□□□□ -0.14
CSDE1-215ENST00000533818 MYL6BP14649 208 aa14.16□□□□□ -0.14
CSDE1-215ENST00000533818 MTFR1Q15390 333 aa14.16□□□□□ -0.14
CSDE1-215ENST00000533818 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
CSDE1-215ENST00000533818 NUP98P52948 1817 aa14.15□□□□□ -0.14
CSDE1-215ENST00000533818 TBC1D16Q8TBP0 767 aa14.15□□□□□ -0.14
CSDE1-215ENST00000533818 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
CSDE1-215ENST00000533818 PTPN18Q99952 460 aa14.15□□□□□ -0.14
CSDE1-215ENST00000533818 RAPGEFL1Q9UHV5 662 aa14.15□□□□□ -0.14
CSDE1-215ENST00000533818 KDM3BQ7LBC6 1761 aa14.14□□□□□ -0.15
CSDE1-215ENST00000533818 BMP8BP34820 402 aa14.14□□□□□ -0.15
CSDE1-215ENST00000533818 PLA2G5P39877 138 aa14.14□□□□□ -0.15
CSDE1-215ENST00000533818 GJA8P48165 433 aa14.14□□□□□ -0.15
CSDE1-215ENST00000533818 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
CSDE1-215ENST00000533818 FAM122AQ96E09 287 aa14.13□□□□□ -0.15
CSDE1-215ENST00000533818 RPTORQ8N122 1335 aa14.13□□□□□ -0.15
CSDE1-215ENST00000533818 SPTBN5Q9NRC6 3674 aaKnown RBP14.12□□□□□ -0.15
CSDE1-215ENST00000533818 WNT10BO00744 389 aa14.12□□□□□ -0.15
CSDE1-215ENST00000533818 U2SURPO15042 1029 aaKnown RBP14.12□□□□□ -0.15
CSDE1-215ENST00000533818 FARP2O94887 1054 aaPredicted RBP14.12□□□□□ -0.15
CSDE1-215ENST00000533818 GJB1P08034 283 aa14.12□□□□□ -0.15
CSDE1-215ENST00000533818 MCM10Q7L590 875 aa14.12□□□□□ -0.15
CSDE1-215ENST00000533818 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
CSDE1-215ENST00000533818 CELF1Q92879 486 aaKnown RBP14.12□□□□□ -0.15
CSDE1-215ENST00000533818 GDF15Q99988 308 aa14.12□□□□□ -0.15
CSDE1-215ENST00000533818 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
CSDE1-215ENST00000533818 TESPA1A2RU30 521 aaPredicted RBP14.11□□□□□ -0.15
CSDE1-215ENST00000533818 BCAMP50895 628 aa14.11□□□□□ -0.15
CSDE1-215ENST00000533818 KIF22Q14807 665 aa14.11□□□□□ -0.15
CSDE1-215ENST00000533818 OGFOD1Q8N543 542 aa14.11□□□□□ -0.15
CSDE1-215ENST00000533818 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
CSDE1-215ENST00000533818 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms