RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 A1BGP04217 495 aa14.2□□□□□ -0.14
ATM-222ENST00000533733 PIP4K2AP48426 406 aaPredicted RBP14.2□□□□□ -0.14
ATM-222ENST00000533733 HSPA2P54652 639 aa14.2□□□□□ -0.14
ATM-222ENST00000533733 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
ATM-222ENST00000533733 CCDC57Q2TAC2 916 aa14.2□□□□□ -0.14
ATM-222ENST00000533733 CEP126Q9P2H0 1117 aa14.2□□□□□ -0.14
ATM-222ENST00000533733 CCDC39Q9UFE4 941 aa14.2□□□□□ -0.14
ATM-222ENST00000533733 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
ATM-222ENST00000533733 VPS37CA5D8V6 355 aaPredicted RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 GADD45BO75293 160 aaPredicted RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 IFIT1P09914 478 aaKnown RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 NEUROD6Q96NK8 337 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 NUP98P52948 1817 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 DISP2A7MBM2 1401 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 RNF113AO15541 343 aaKnown RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 ZBTB38Q8NAP3 1195 aaPredicted RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 DDX54Q8TDD1 881 aaKnown RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 ZSCAN16Q9H4T2 348 aaPredicted RBP14.18□□□□□ -0.14
ATM-222ENST00000533733 ZBTB3Q9H5J0 574 aa14.18□□□□□ -0.14
ATM-222ENST00000533733 A0A1B0GUL7 405 aa14.17□□□□□ -0.14
ATM-222ENST00000533733 CSF1RP07333 972 aa14.17□□□□□ -0.14
ATM-222ENST00000533733 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
ATM-222ENST00000533733 DHX32Q7L7V1 743 aaKnown RBP14.17□□□□□ -0.14
ATM-222ENST00000533733 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
ATM-222ENST00000533733 CHAMP1Q96JM3 812 aa14.17□□□□□ -0.14
ATM-222ENST00000533733 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
ATM-222ENST00000533733 GDPD2Q9HCC8 539 aa14.17□□□□□ -0.14
ATM-222ENST00000533733 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
ATM-222ENST00000533733 CICQ96RK0 1608 aaPredicted RBP14.16□□□□□ -0.14
ATM-222ENST00000533733 FIBPO43427 364 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 CYP21A2P08686 494 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 ATL3Q6DD88 541 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
ATM-222ENST00000533733 NECAB1Q8N987 351 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
ATM-222ENST00000533733 STRN4Q9NRL3 753 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 MAP3K15Q6ZN16 1313 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.16□□□□□ -0.14
ATM-222ENST00000533733 DDX60Q8IY21 1712 aaKnown RBP14.16□□□□□ -0.14
ATM-222ENST00000533733 ARAP2Q8WZ64 1704 aa14.16□□□□□ -0.14
ATM-222ENST00000533733 GOLIM4O00461 696 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 ZNF500O60304 480 aaPredicted RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 PFKFB2O60825 505 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 LARP6Q9BRS8 491 aaKnown RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 AHDC1Q5TGY3 1603 aaPredicted RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 IFIT5Q13325 482 aaKnown RBP14.15□□□□□ -0.14
ATM-222ENST00000533733 ZSCAN25Q6NSZ9 544 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 Q6ZUG5 572 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 SMARCC2Q8TAQ2 1214 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 AK7Q96M32 723 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 BCL9O00512 1426 aa14.15□□□□□ -0.14
ATM-222ENST00000533733 TERF1P54274 439 aa14.14□□□□□ -0.15
ATM-222ENST00000533733 FGD1P98174 961 aa14.14□□□□□ -0.15
ATM-222ENST00000533733 TAF7LQ5H9L4 462 aa14.14□□□□□ -0.15
ATM-222ENST00000533733 TTC39AQ5SRH9 613 aa14.14□□□□□ -0.15
ATM-222ENST00000533733 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.14□□□□□ -0.15
ATM-222ENST00000533733 CDCA7Q9BWT1 371 aaPredicted RBP14.14□□□□□ -0.15
ATM-222ENST00000533733 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
ATM-222ENST00000533733 CFAP45Q9UL16 551 aa14.14□□□□□ -0.15
ATM-222ENST00000533733 ZKSCAN5Q9Y2L8 839 aa14.14□□□□□ -0.15
ATM-222ENST00000533733 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
ATM-222ENST00000533733 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
ATM-222ENST00000533733 ERVV-1B6SEH8 477 aa14.13□□□□□ -0.15
ATM-222ENST00000533733 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
ATM-222ENST00000533733 TIMM10P62072 90 aa14.13□□□□□ -0.15
ATM-222ENST00000533733 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
ATM-222ENST00000533733 LRRC24Q50LG9 513 aa14.13□□□□□ -0.15
ATM-222ENST00000533733 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
ATM-222ENST00000533733 NAA16Q6N069 864 aaPredicted RBP14.13□□□□□ -0.15
ATM-222ENST00000533733 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
ATM-222ENST00000533733 ZNF274Q96GC6 653 aaPredicted RBP14.13□□□□□ -0.15
ATM-222ENST00000533733 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
ATM-222ENST00000533733 GOLGA6L4A6NEF3 574 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 CCDC192P0DO97 292 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 HSPD1P10809 573 aaKnown RBP14.12□□□□□ -0.15
ATM-222ENST00000533733 EXOSC10Q01780 885 aaKnown RBP14.12□□□□□ -0.15
ATM-222ENST00000533733 CDC37L1Q7L3B6 337 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 PIGBQ92521 554 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.15
ATM-222ENST00000533733 ATRNO75882 1429 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 MAST3O60307 1309 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 CAVIN2O95810 425 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
ATM-222ENST00000533733 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 DNAJC10Q8IXB1 793 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 SEC62Q99442 399 aaKnown RBP14.12□□□□□ -0.15
ATM-222ENST00000533733 FUCA2Q9BTY2 467 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 LRP5O75197 1615 aa14.12□□□□□ -0.15
ATM-222ENST00000533733 LAMB2P55268 1798 aa14.11□□□□□ -0.15
ATM-222ENST00000533733 NWD2Q9ULI1 1742 aa14.11□□□□□ -0.15
ATM-222ENST00000533733 RREB1Q92766 1687 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms