RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
TRIM3-212ENST00000533064 BSDC1Q9NW68 430 aaPredicted RBP17.51■□□□□ 0.39
TRIM3-212ENST00000533064 MROH5Q6ZUA9 1318 aa17.51■□□□□ 0.39
TRIM3-212ENST00000533064 COL4A1P02462 1669 aa17.5■□□□□ 0.39
TRIM3-212ENST00000533064 TFCP2Q12800 502 aa17.5■□□□□ 0.39
TRIM3-212ENST00000533064 SPON1Q9HCB6 807 aa17.5■□□□□ 0.39
TRIM3-212ENST00000533064 RIPOR2Q9Y4F9 1068 aa17.5■□□□□ 0.39
TRIM3-212ENST00000533064 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
TRIM3-212ENST00000533064 MYH13Q9UKX3 1938 aa17.49■□□□□ 0.39
TRIM3-212ENST00000533064 AKAP2Q9Y2D5 859 aa17.49■□□□□ 0.39
TRIM3-212ENST00000533064 ARAP2Q8WZ64 1704 aa17.49■□□□□ 0.39
TRIM3-212ENST00000533064 BRCA1P38398 1863 aaKnown RBP17.49■□□□□ 0.39
TRIM3-212ENST00000533064 RGS3P49796 1198 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRIM3-212ENST00000533064 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 SOCS7O14512 581 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 BBOX1O75936 387 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 IFIT2P09913 472 aaKnown RBP17.48■□□□□ 0.39
TRIM3-212ENST00000533064 TMC4Q7Z404 712 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 SGIP1Q9BQI5 828 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 KIAA1551Q9HCM1 1747 aa17.48■□□□□ 0.39
TRIM3-212ENST00000533064 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
TRIM3-212ENST00000533064 AACSQ86V21 672 aa17.47■□□□□ 0.39
TRIM3-212ENST00000533064 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
TRIM3-212ENST00000533064 PTGER2P43116 358 aa17.46■□□□□ 0.39
TRIM3-212ENST00000533064 CHRNDQ07001 517 aa17.46■□□□□ 0.39
TRIM3-212ENST00000533064 TNNI3KQ59H18 835 aa17.46■□□□□ 0.39
TRIM3-212ENST00000533064 CNKSR1Q969H4 720 aa17.46■□□□□ 0.39
TRIM3-212ENST00000533064 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
TRIM3-212ENST00000533064 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
TRIM3-212ENST00000533064 FPGT-TNNI3KV9GXZ4 949 aa17.46■□□□□ 0.39
TRIM3-212ENST00000533064 PDE8BO95263 885 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 CHRNA5P30532 468 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 MINPP1Q9UNW1 487 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 ZNF609O15014 1411 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 PPEF1O14829 653 aaPredicted RBP17.45■□□□□ 0.38
TRIM3-212ENST00000533064 PDE4AP27815 886 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 TGFB2P61812 414 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 C16orf71Q8IYS4 520 aaPredicted RBP17.45■□□□□ 0.38
TRIM3-212ENST00000533064 NEUROD6Q96NK8 337 aa17.45■□□□□ 0.38
TRIM3-212ENST00000533064 PUM3Q15397 648 aaKnown RBP17.44■□□□□ 0.38
TRIM3-212ENST00000533064 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
TRIM3-212ENST00000533064 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
TRIM3-212ENST00000533064 EAF2Q96CJ1 260 aaPredicted RBP17.44■□□□□ 0.38
TRIM3-212ENST00000533064 CD2APQ9Y5K6 639 aa17.44■□□□□ 0.38
TRIM3-212ENST00000533064 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
TRIM3-212ENST00000533064 MX1P20591 662 aa17.43■□□□□ 0.38
TRIM3-212ENST00000533064 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
TRIM3-212ENST00000533064 CCDC8Q9H0W5 538 aaPredicted RBP17.43■□□□□ 0.38
TRIM3-212ENST00000533064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
TRIM3-212ENST00000533064 TAF5LO75529 589 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 KCNJ4P48050 445 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 ANKIB1Q9P2G1 1089 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 CHD4Q14839 1912 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 SLC5A1P13866 664 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 TIMM10P62072 90 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 LPIN2Q92539 896 aa17.42■□□□□ 0.38
TRIM3-212ENST00000533064 ARFGEF1Q9Y6D6 1849 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 XDHP47989 1333 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 A0A0G2JLW4 131 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 IFIT1P09914 478 aaKnown RBP17.41■□□□□ 0.38
TRIM3-212ENST00000533064 DPEP1P16444 411 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 PDE1AP54750 535 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 UBE4AQ14139 1066 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
TRIM3-212ENST00000533064 TTLL6Q8N841 843 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 OTUD7AQ8TE49 926 aaPredicted RBP17.41■□□□□ 0.38
TRIM3-212ENST00000533064 ATP6V0A2Q9Y487 856 aa17.41■□□□□ 0.38
TRIM3-212ENST00000533064 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
TRIM3-212ENST00000533064 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 LTBP1Q14766 1721 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 ERC2O15083 957 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 MYH7P12883 1935 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 AOX1Q06278 1338 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 SALL3Q9BXA9 1300 aa17.4■□□□□ 0.38
TRIM3-212ENST00000533064 DBNDD2Q9BQY9 259 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 PIM2Q9P1W9 311 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
TRIM3-212ENST00000533064 NSFL1CQ9UNZ2 370 aaKnown RBP17.39■□□□□ 0.37
TRIM3-212ENST00000533064 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 FGFR2P21802 821 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 XAGE2Q96GT9 111 aa17.39■□□□□ 0.37
TRIM3-212ENST00000533064 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
TRIM3-212ENST00000533064 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
TRIM3-212ENST00000533064 ZNF804BA4D1E1 1349 aa17.37■□□□□ 0.37
TRIM3-212ENST00000533064 GLRX3O76003 335 aaKnown RBP17.37■□□□□ 0.37
TRIM3-212ENST00000533064 KCNA3P22001 575 aa17.37■□□□□ 0.37
TRIM3-212ENST00000533064 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms