RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SIP14410 1827 aa2.57□□□□□ -2
KNL1-211ENST00000533001 C21orf2O43822 256 aa2.57□□□□□ -2
KNL1-211ENST00000533001 MAP3K11Q16584 847 aa2.57□□□□□ -2
KNL1-211ENST00000533001 CERS5Q8N5B7 392 aa2.57□□□□□ -2
KNL1-211ENST00000533001 MCOLN1Q9GZU1 580 aa2.57□□□□□ -2
KNL1-211ENST00000533001 TRIM35Q9UPQ4 493 aa2.57□□□□□ -2
KNL1-211ENST00000533001 CLEC4GQ6UXB4 293 aa2.57□□□□□ -2
KNL1-211ENST00000533001 RNF181Q9P0P0 153 aa2.57□□□□□ -2
KNL1-211ENST00000533001 POLLQ9UGP5 575 aa2.57□□□□□ -2
KNL1-211ENST00000533001 TRIM28Q13263 835 aaKnown RBP2.57□□□□□ -2
KNL1-211ENST00000533001 GRIK5Q16478 980 aa2.57□□□□□ -2
KNL1-211ENST00000533001 KRT24Q2M2I5 525 aa2.57□□□□□ -2
KNL1-211ENST00000533001 STYK1Q6J9G0 422 aa2.57□□□□□ -2
KNL1-211ENST00000533001 CYP4F22Q6NT55 531 aa2.57□□□□□ -2
KNL1-211ENST00000533001 ARMC5Q96C12 935 aa2.57□□□□□ -2
KNL1-211ENST00000533001 COL11A1P12107 1806 aaPredicted RBP2.57□□□□□ -2
KNL1-211ENST00000533001 COL4A4P53420 1690 aaPredicted RBP2.57□□□□□ -2
KNL1-211ENST00000533001 IGF2BP3O00425 579 aaKnown RBP eCLIP2.57□□□□□ -2
KNL1-211ENST00000533001 MAPK8IP2Q13387 824 aaPredicted RBP2.57□□□□□ -2
KNL1-211ENST00000533001 SUSD4Q5VX71 490 aa2.57□□□□□ -2
KNL1-211ENST00000533001 PKD1L1Q8TDX9 2849 aa2.57□□□□□ -2
KNL1-211ENST00000533001 KIAA2012Q0VF49 1180 aa2.57□□□□□ -2
KNL1-211ENST00000533001 MKRN1Q9UHC7 482 aaKnown RBP2.57□□□□□ -2
KNL1-211ENST00000533001 ATP6V1AP38606 617 aa2.56□□□□□ -2
KNL1-211ENST00000533001 EIF4A1P60842 406 aaKnown RBP2.56□□□□□ -2
KNL1-211ENST00000533001 AKAP4Q5JQC9 854 aa2.56□□□□□ -2
KNL1-211ENST00000533001 TNS4Q8IZW8 715 aa2.56□□□□□ -2
KNL1-211ENST00000533001 PTCD1O75127 700 aaKnown RBP2.56□□□□□ -2
KNL1-211ENST00000533001 SLC10A3P09131 477 aa2.56□□□□□ -2
KNL1-211ENST00000533001 MOB2Q70IA6 237 aa2.56□□□□□ -2
KNL1-211ENST00000533001 LDHDQ86WU2 507 aa2.56□□□□□ -2
KNL1-211ENST00000533001 ISCA1Q9BUE6 129 aa2.56□□□□□ -2
KNL1-211ENST00000533001 CCDC87Q9NVE4 849 aa2.56□□□□□ -2
KNL1-211ENST00000533001 IGKV5-2P06315 115 aa2.56□□□□□ -2
KNL1-211ENST00000533001 SMC1BQ8NDV3 1235 aa2.56□□□□□ -2
KNL1-211ENST00000533001 SMARCC1Q92922 1105 aaPredicted RBP2.56□□□□□ -2
KNL1-211ENST00000533001 BCS1LQ9Y276 419 aa2.56□□□□□ -2
KNL1-211ENST00000533001 ABCA12Q86UK0 2595 aa2.56□□□□□ -2
KNL1-211ENST00000533001 ABCC4O15439 1325 aa2.56□□□□□ -2
KNL1-211ENST00000533001 ZNF521Q96K83 1311 aa2.56□□□□□ -2
KNL1-211ENST00000533001 TM4SF4P48230 202 aa2.56□□□□□ -2
KNL1-211ENST00000533001 BRPF1P55201 1214 aaPredicted RBP2.56□□□□□ -2
KNL1-211ENST00000533001 GPC2Q8N158 579 aa2.56□□□□□ -2
KNL1-211ENST00000533001 TTLL6Q8N841 843 aa2.56□□□□□ -2
KNL1-211ENST00000533001 PHF14O94880 888 aa2.55□□□□□ -2
KNL1-211ENST00000533001 MAP2K2P36507 400 aa2.55□□□□□ -2
KNL1-211ENST00000533001 FKBP4Q02790 459 aaKnown RBP eCLIP2.55□□□□□ -2
KNL1-211ENST00000533001 LTV1Q96GA3 475 aaPredicted RBP2.55□□□□□ -2
KNL1-211ENST00000533001 PODXL2Q9NZ53 605 aa2.55□□□□□ -2
KNL1-211ENST00000533001 KMT2EQ8IZD2 1858 aa2.55□□□□□ -2
KNL1-211ENST00000533001 SLURP2P0DP57 97 aa2.55□□□□□ -2
KNL1-211ENST00000533001 KLRK1P26718 216 aa2.55□□□□□ -2
KNL1-211ENST00000533001 HABP4Q5JVS0 413 aaKnown RBP2.55□□□□□ -2
KNL1-211ENST00000533001 TSKSQ9UJT2 592 aa2.55□□□□□ -2
KNL1-211ENST00000533001 DOCK6Q96HP0 2047 aa2.55□□□□□ -2
KNL1-211ENST00000533001 CDHR2Q9BYE9 1310 aa2.55□□□□□ -2
KNL1-211ENST00000533001 ZNF462Q96JM2 2506 aa2.55□□□□□ -2
KNL1-211ENST00000533001 DSG3P32926 999 aa2.55□□□□□ -2
KNL1-211ENST00000533001 MAP3K10Q02779 954 aa2.55□□□□□ -2
KNL1-211ENST00000533001 SULT6B1Q6IMI4 303 aa2.55□□□□□ -2
KNL1-211ENST00000533001 VGLL2Q8N8G2 317 aa2.55□□□□□ -2
KNL1-211ENST00000533001 CAPNS2Q96L46 248 aa2.55□□□□□ -2
KNL1-211ENST00000533001 ZNF277Q9NRM2 450 aaPredicted RBP2.55□□□□□ -2
KNL1-211ENST00000533001 SPTAN1Q13813 2472 aaKnown RBP2.55□□□□□ -2
KNL1-211ENST00000533001 WDR81Q562E7 1941 aa2.55□□□□□ -2
KNL1-211ENST00000533001 RPAP1Q9BWH6 1393 aaPredicted RBP2.55□□□□□ -2
KNL1-211ENST00000533001 MTHFSP49914 203 aa2.55□□□□□ -2
KNL1-211ENST00000533001 TRAPPC3LQ5T215 181 aa2.55□□□□□ -2
KNL1-211ENST00000533001 CNTROBQ8N137 903 aa2.55□□□□□ -2
KNL1-211ENST00000533001 CELF1Q92879 486 aaKnown RBP2.55□□□□□ -2
KNL1-211ENST00000533001 GLIS2Q9BZE0 524 aaPredicted RBP2.55□□□□□ -2
KNL1-211ENST00000533001 C11orf16Q9NQ32 467 aa2.55□□□□□ -2
KNL1-211ENST00000533001 PPP1R1BQ9UD71 204 aaPredicted RBP2.55□□□□□ -2
KNL1-211ENST00000533001 TCF20Q9UGU0 1960 aaKnown RBP2.55□□□□□ -2
KNL1-211ENST00000533001 CACNA1IQ9P0X4 2223 aa2.55□□□□□ -2
KNL1-211ENST00000533001 HRNRQ86YZ3 2850 aaPredicted RBP2.55□□□□□ -2
KNL1-211ENST00000533001 SNAP23O00161 211 aa2.55□□□□□ -2
KNL1-211ENST00000533001 DALRD3Q5D0E6 543 aaKnown RBP2.55□□□□□ -2
KNL1-211ENST00000533001 GIGYF2Q6Y7W6 1299 aaKnown RBP2.55□□□□□ -2
KNL1-211ENST00000533001 NAV1Q8NEY1 1877 aa2.54□□□□□ -2
KNL1-211ENST00000533001 TMEM88BA6NKF7 163 aa2.54□□□□□ -2
KNL1-211ENST00000533001 POTEB2H3BUK9 544 aa2.54□□□□□ -2
KNL1-211ENST00000533001 SF3B3Q15393 1217 aaKnown RBP2.54□□□□□ -2
KNL1-211ENST00000533001 TBC1D2BQ9UPU7 963 aa2.54□□□□□ -2
KNL1-211ENST00000533001 RTCBQ9Y3I0 505 aaKnown RBP2.54□□□□□ -2
KNL1-211ENST00000533001 NOTCH4Q99466 2003 aa2.54□□□□□ -2
KNL1-211ENST00000533001 SCN5AQ14524 2016 aa2.54□□□□□ -2
KNL1-211ENST00000533001 VIL1P09327 827 aaKnown RBP2.54□□□□□ -2
KNL1-211ENST00000533001 PRPF38BQ5VTL8 546 aaKnown RBP2.54□□□□□ -2
KNL1-211ENST00000533001 CARD11Q9BXL7 1154 aa2.54□□□□□ -2
KNL1-211ENST00000533001 SPINK5Q9NQ38 1064 aaPredicted RBP2.54□□□□□ -2
KNL1-211ENST00000533001 DCTN1Q14203 1278 aa2.54□□□□□ -2
KNL1-211ENST00000533001 PANK3Q9H999 370 aa2.54□□□□□ -2
KNL1-211ENST00000533001 ATP6V0A2Q9Y487 856 aa2.54□□□□□ -2
KNL1-211ENST00000533001 DOCK1Q14185 1865 aa2.54□□□□□ -2
KNL1-211ENST00000533001 MYH2Q9UKX2 1941 aa2.54□□□□□ -2
KNL1-211ENST00000533001 SCN10AQ9Y5Y9 1956 aa2.54□□□□□ -2
KNL1-211ENST00000533001 MYO10Q9HD67 2058 aa2.54□□□□□ -2
KNL1-211ENST00000533001 SCAF8Q9UPN6 1271 aaKnown RBP2.54□□□□□ -2
KNL1-211ENST00000533001 CHL1O00533 1208 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms