RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
LMO7-222ENST00000532785 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
LMO7-222ENST00000532785 SPACA7Q96KW9 195 aa12.5□□□□□ -0.41
LMO7-222ENST00000532785 J3QW42 95 aa12.49□□□□□ -0.41
LMO7-222ENST00000532785 ECM1Q16610 540 aa12.49□□□□□ -0.41
LMO7-222ENST00000532785 PERM1Q5SV97 790 aa12.49□□□□□ -0.41
LMO7-222ENST00000532785 GJD3Q8N144 294 aa12.49□□□□□ -0.41
LMO7-222ENST00000532785 NOP53Q9NZM5 478 aaKnown RBP12.49□□□□□ -0.41
LMO7-222ENST00000532785 HOXD8P13378 290 aaPredicted RBP12.48□□□□□ -0.41
LMO7-222ENST00000532785 C20orf204Q6ZNR8 217 aa12.48□□□□□ -0.41
LMO7-222ENST00000532785 NCAPG2Q86XI2 1143 aa12.48□□□□□ -0.41
LMO7-222ENST00000532785 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
LMO7-222ENST00000532785 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
LMO7-222ENST00000532785 CES1P23141 567 aa12.47□□□□□ -0.41
LMO7-222ENST00000532785 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
LMO7-222ENST00000532785 SNX29Q8TEQ0 813 aa12.47□□□□□ -0.41
LMO7-222ENST00000532785 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
LMO7-222ENST00000532785 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
LMO7-222ENST00000532785 PHACTR2O75167 634 aa12.46□□□□□ -0.41
LMO7-222ENST00000532785 CYP2E1P05181 493 aaPredicted RBP12.46□□□□□ -0.41
LMO7-222ENST00000532785 KCNMA1Q12791 1236 aa12.46□□□□□ -0.41
LMO7-222ENST00000532785 LPIN3Q9BQK8 851 aa12.46□□□□□ -0.41
LMO7-222ENST00000532785 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
LMO7-222ENST00000532785 KANSL3Q9P2N6 904 aa12.46□□□□□ -0.41
LMO7-222ENST00000532785 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
LMO7-222ENST00000532785 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
LMO7-222ENST00000532785 PMEPA1Q969W9 287 aa12.45□□□□□ -0.42
LMO7-222ENST00000532785 PLD4Q96BZ4 506 aa12.45□□□□□ -0.42
LMO7-222ENST00000532785 TNFRSF21O75509 655 aa12.44□□□□□ -0.42
LMO7-222ENST00000532785 RASSF7Q02833 373 aa12.44□□□□□ -0.42
LMO7-222ENST00000532785 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
LMO7-222ENST00000532785 PLVAPQ9BX97 442 aa12.44□□□□□ -0.42
LMO7-222ENST00000532785 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
LMO7-222ENST00000532785 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
LMO7-222ENST00000532785 SUV39H2Q9H5I1 410 aa12.43□□□□□ -0.42
LMO7-222ENST00000532785 FOXD3Q9UJU5 478 aaPredicted RBP12.43□□□□□ -0.42
LMO7-222ENST00000532785 NEFLP07196 543 aa12.42□□□□□ -0.42
LMO7-222ENST00000532785 MAPK1P28482 360 aa12.42□□□□□ -0.42
LMO7-222ENST00000532785 AFF1P51825 1210 aaKnown RBP12.42□□□□□ -0.42
LMO7-222ENST00000532785 TMEM151AQ8N4L1 468 aa12.42□□□□□ -0.42
LMO7-222ENST00000532785 GDF11O95390 407 aa12.41□□□□□ -0.42
LMO7-222ENST00000532785 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
LMO7-222ENST00000532785 DCTN4Q9UJW0 460 aa12.41□□□□□ -0.42
LMO7-222ENST00000532785 SMNDC1O75940 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
LMO7-222ENST00000532785 NID1P14543 1247 aa12.4□□□□□ -0.42
LMO7-222ENST00000532785 PRRT3Q5FWE3 981 aa12.4□□□□□ -0.42
LMO7-222ENST00000532785 GDF6Q6KF10 455 aaPredicted RBP12.4□□□□□ -0.42
LMO7-222ENST00000532785 KIF4AO95239 1232 aa12.39□□□□□ -0.43
LMO7-222ENST00000532785 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
LMO7-222ENST00000532785 TTC9Q92623 222 aa12.39□□□□□ -0.43
LMO7-222ENST00000532785 CHRDQ9H2X0 955 aa12.39□□□□□ -0.43
LMO7-222ENST00000532785 EREGO14944 169 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 ATP11AP98196 1134 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 WFDC8Q8IUA0 241 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 HOMEZQ8IX15 550 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 DMRTB1Q96MA1 342 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 FAM129BQ96TA1 746 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 RBCK1Q9BYM8 510 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
LMO7-222ENST00000532785 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
LMO7-222ENST00000532785 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
LMO7-222ENST00000532785 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
LMO7-222ENST00000532785 SALL4Q9UJQ4 1053 aa12.37□□□□□ -0.43
LMO7-222ENST00000532785 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
LMO7-222ENST00000532785 EDN3P14138 238 aa12.36□□□□□ -0.43
LMO7-222ENST00000532785 COL8A1P27658 744 aa12.36□□□□□ -0.43
LMO7-222ENST00000532785 RAC1P63000 192 aa12.36□□□□□ -0.43
LMO7-222ENST00000532785 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
LMO7-222ENST00000532785 DMRTC2Q8IXT2 367 aaPredicted RBP12.36□□□□□ -0.43
LMO7-222ENST00000532785 CEP120Q8N960 986 aa12.35□□□□□ -0.43
LMO7-222ENST00000532785 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
LMO7-222ENST00000532785 PBX4Q9BYU1 374 aa12.35□□□□□ -0.43
LMO7-222ENST00000532785 NIF3L1Q9GZT8 377 aa12.35□□□□□ -0.43
LMO7-222ENST00000532785 ZFYVE28Q9HCC9 887 aa12.35□□□□□ -0.43
LMO7-222ENST00000532785 TRIM33Q9UPN9 1127 aa12.35□□□□□ -0.43
LMO7-222ENST00000532785 FAM229AH3BQW9 127 aa12.34□□□□□ -0.43
LMO7-222ENST00000532785 GPR182O15218 404 aa12.34□□□□□ -0.43
LMO7-222ENST00000532785 GSK3AP49840 483 aa12.34□□□□□ -0.43
LMO7-222ENST00000532785 GRIK5Q16478 980 aa12.34□□□□□ -0.43
LMO7-222ENST00000532785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.34□□□□□ -0.43
LMO7-222ENST00000532785 SPATA31C1P0DKV0 1188 aa12.33□□□□□ -0.44
LMO7-222ENST00000532785 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
LMO7-222ENST00000532785 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
LMO7-222ENST00000532785 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.44
LMO7-222ENST00000532785 LACRTQ9GZZ8 138 aa12.33□□□□□ -0.44
LMO7-222ENST00000532785 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
LMO7-222ENST00000532785 ORC1Q13415 861 aa12.32□□□□□ -0.44
LMO7-222ENST00000532785 CACTIN-AS1Q8N1I8 211 aa12.32□□□□□ -0.44
LMO7-222ENST00000532785 CPNE3O75131 537 aaKnown RBP12.31□□□□□ -0.44
LMO7-222ENST00000532785 ACPPP15309 386 aa12.31□□□□□ -0.44
LMO7-222ENST00000532785 SND1Q7KZF4 910 aaKnown RBP eCLIP12.31□□□□□ -0.44
LMO7-222ENST00000532785 OSMRQ99650 979 aa12.31□□□□□ -0.44
LMO7-222ENST00000532785 A0A0A0MRY4 1105 aa12.3□□□□□ -0.44
LMO7-222ENST00000532785 APBA3O96018 575 aa12.3□□□□□ -0.44
LMO7-222ENST00000532785 PTPRAP18433 802 aa12.3□□□□□ -0.44
LMO7-222ENST00000532785 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
LMO7-222ENST00000532785 PDE2AO00408 941 aaPredicted RBP12.29□□□□□ -0.44
LMO7-222ENST00000532785 TRPA1O75762 1119 aa12.28□□□□□ -0.44
LMO7-222ENST00000532785 CDC27P30260 824 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms