RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 EYA2O00167 538 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 PDE4BQ07343 736 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 DDB1Q16531 1140 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 ARHGAP29Q52LW3 1261 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 EIF5P55010 431 aaKnown RBP17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 KIF5BP33176 963 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 GCKRQ14397 625 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 MRPS27Q92552 414 aaKnown RBP17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 ZNF496Q96IT1 587 aaPredicted RBP17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 DBNDD2Q9BQY9 259 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 ZSCAN12O43309 604 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 CYP7A1P22680 504 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 TIMM10P62072 90 aa17.71■□□□□ 0.43
PCDHA3-202ENST00000532566 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 APOBRQ0VD83 1088 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 SLC4A4Q9Y6R1 1079 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 UBXN4Q92575 508 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 ESR2Q92731 530 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 IQSEC3Q9UPP2 1182 aaPredicted RBP17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 ROBO2Q9HCK4 1378 aa17.7■□□□□ 0.42
PCDHA3-202ENST00000532566 GIGYF1O75420 1035 aaPredicted RBP17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 BAG3O95817 575 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 TNNT1P13805 278 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 SYKP43405 635 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 NBPF5PQ86XG9 351 aaPredicted RBP17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 TXLNBQ8N3L3 684 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 C16orf45Q96MC5 204 aaPredicted RBP17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 PRR36Q9H6K5 1346 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 PDCL2Q8N4E4 241 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 USP6P35125 1406 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
PCDHA3-202ENST00000532566 RTN1Q16799 776 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 NOM1Q5C9Z4 860 aaKnown RBP17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 SLC27A2O14975 620 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 SPHKAPQ2M3C7 1700 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 KCNQ3O43525 872 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 HSPA4P34932 840 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
PCDHA3-202ENST00000532566 CDR1P51861 262 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 RNF17Q9BXT8 1623 aaKnown RBP17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 TMOD2Q9NZR1 351 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 ERLIN1O75477 346 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 KAT14Q9H8E8 782 aa17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 TRMT1Q9NXH9 659 aaKnown RBP17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 CDK12Q9NYV4 1490 aaPredicted RBP17.67■□□□□ 0.42
PCDHA3-202ENST00000532566 ISM2Q6H9L7 571 aa17.66■□□□□ 0.42
PCDHA3-202ENST00000532566 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
PCDHA3-202ENST00000532566 A1BGP04217 495 aa17.66■□□□□ 0.42
PCDHA3-202ENST00000532566 TYRO3Q06418 890 aa17.66■□□□□ 0.42
PCDHA3-202ENST00000532566 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
PCDHA3-202ENST00000532566 HS1BP3Q53T59 392 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 NAA16Q6N069 864 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 RFC4P35249 363 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 ZNF76P36508 570 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 KBTBD3Q8NAB2 608 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 SPTLC2O15270 562 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 GNAT2P19087 354 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 CCDC129Q6ZRS4 1044 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 CCDC12Q8WUD4 166 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
PCDHA3-202ENST00000532566 IBTKQ9P2D0 1353 aaPredicted RBP17.64■□□□□ 0.42
PCDHA3-202ENST00000532566 BEND3Q5T5X7 828 aa17.64■□□□□ 0.42
PCDHA3-202ENST00000532566 CCDC181Q5TID7 509 aa17.64■□□□□ 0.42
PCDHA3-202ENST00000532566 PYM1Q9BRP8 204 aaKnown RBP17.64■□□□□ 0.42
PCDHA3-202ENST00000532566 MADDQ8WXG6 1647 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 KIAA1328Q86T90 577 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 BTG4Q9NY30 223 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 BMP15O95972 392 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms