RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 BICC1Q9H694 974 aaKnown RBP10.09□□□□□ -0.79
TRIM49-202ENST00000532501 LRRFIP2Q9Y608 721 aaKnown RBP10.09□□□□□ -0.79
TRIM49-202ENST00000532501 KIF13BQ9NQT8 1826 aa10.09□□□□□ -0.79
TRIM49-202ENST00000532501 SRGNP10124 158 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 GTF2E1P29083 439 aaPredicted RBP10.08□□□□□ -0.8
TRIM49-202ENST00000532501 CTSWP56202 376 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 ST5P78524 1137 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 C2CD5Q86YS7 1000 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 PLA2G12BQ9BX93 195 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 GREM2Q9H772 168 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 LAMB2P55268 1798 aa10.08□□□□□ -0.8
TRIM49-202ENST00000532501 NPHP1O15259 732 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 PDE3AQ14432 1141 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
TRIM49-202ENST00000532501 TTLL11Q8NHH1 800 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 EXOC6Q8TAG9 804 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 CELF1Q92879 486 aaKnown RBP10.07□□□□□ -0.8
TRIM49-202ENST00000532501 C9orf78Q9NZ63 289 aaPredicted RBP10.07□□□□□ -0.8
TRIM49-202ENST00000532501 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 PDE8AO60658 829 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 CSF1RP07333 972 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 SF3B3Q15393 1217 aaKnown RBP10.07□□□□□ -0.8
TRIM49-202ENST00000532501 RABL6Q3YEC7 729 aaPredicted RBP10.07□□□□□ -0.8
TRIM49-202ENST00000532501 LMBR1LQ6UX01 489 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.07□□□□□ -0.8
TRIM49-202ENST00000532501 KLHDC4Q8TBB5 520 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 FAM212AQ96EL1 285 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 ZBTB40Q9NUA8 1239 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 UTRNP46939 3433 aa10.07□□□□□ -0.8
TRIM49-202ENST00000532501 SNED1Q8TER0 1413 aa10.06□□□□□ -0.8
TRIM49-202ENST00000532501 PNMA6EA0A0J9YXQ4 647 aa10.06□□□□□ -0.8
TRIM49-202ENST00000532501 WTIPA6NIX2 430 aaPredicted RBP10.06□□□□□ -0.8
TRIM49-202ENST00000532501 UBTFL1P0CB47 393 aaPredicted RBP10.06□□□□□ -0.8
TRIM49-202ENST00000532501 YBX3P16989 372 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRIM49-202ENST00000532501 RFX5P48382 616 aaPredicted RBP10.06□□□□□ -0.8
TRIM49-202ENST00000532501 NUBP1P53384 320 aa10.06□□□□□ -0.8
TRIM49-202ENST00000532501 SIRT2Q8IXJ6 389 aa10.06□□□□□ -0.8
TRIM49-202ENST00000532501 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
TRIM49-202ENST00000532501 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
TRIM49-202ENST00000532501 TAF1P21675 1872 aa10.05□□□□□ -0.8
TRIM49-202ENST00000532501 HOXA10P31260 410 aaPredicted RBP10.05□□□□□ -0.8
TRIM49-202ENST00000532501 ZNF622Q969S3 477 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRIM49-202ENST00000532501 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
TRIM49-202ENST00000532501 PA2G4Q9UQ80 394 aaKnown RBP10.05□□□□□ -0.8
TRIM49-202ENST00000532501 NPR1P16066 1061 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 PDE6BP35913 854 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 TGFB2P61812 414 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
TRIM49-202ENST00000532501 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 RTL9Q8NET4 1388 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 PUS3Q9BZE2 481 aaKnown RBP10.04□□□□□ -0.8
TRIM49-202ENST00000532501 PCDHB15Q9Y5E8 787 aa10.04□□□□□ -0.8
TRIM49-202ENST00000532501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
TRIM49-202ENST00000532501 SLX4Q8IY92 1834 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 H0YIN7 160 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 SNAP23O00161 211 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 GNAI2P04899 355 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 MS4A1P11836 297 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 ITGA6P23229 1130 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 PRELPP51888 382 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 GRAPQ13588 217 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 STYK1Q6J9G0 422 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 GRAPLQ8TC17 118 aaPredicted RBP10.03□□□□□ -0.8
TRIM49-202ENST00000532501 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 CHMP3Q9Y3E7 222 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
TRIM49-202ENST00000532501 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
TRIM49-202ENST00000532501 GNAI3P08754 354 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 PTPN12Q05209 780 aaKnown RBP10.02□□□□□ -0.81
TRIM49-202ENST00000532501 MTX1Q13505 466 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 CCDC152Q4G0S7 254 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 LRRC24Q50LG9 513 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 RPGRQ92834 1020 aaKnown RBP10.02□□□□□ -0.81
TRIM49-202ENST00000532501 GPR101Q96P66 508 aaPredicted RBP10.02□□□□□ -0.81
TRIM49-202ENST00000532501 CRAMP1Q96RY5 1269 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 DDX19BQ9UMR2 479 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 BCS1LQ9Y276 419 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 DUOX1Q9NRD9 1551 aa10.02□□□□□ -0.81
TRIM49-202ENST00000532501 NFKBIEO00221 500 aa10.01□□□□□ -0.81
TRIM49-202ENST00000532501 C21orf2O43822 256 aa10.01□□□□□ -0.81
TRIM49-202ENST00000532501 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
TRIM49-202ENST00000532501 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
TRIM49-202ENST00000532501 PPEF1O14829 653 aaPredicted RBP10□□□□□ -0.81
TRIM49-202ENST00000532501 RASSF7Q02833 373 aa10□□□□□ -0.81
TRIM49-202ENST00000532501 DDX46Q7L014 1031 aaKnown RBP10□□□□□ -0.81
TRIM49-202ENST00000532501 TTLL6Q8N841 843 aa10□□□□□ -0.81
TRIM49-202ENST00000532501 RBM17Q96I25 401 aaKnown RBP10□□□□□ -0.81
TRIM49-202ENST00000532501 PIM2Q9P1W9 311 aa10□□□□□ -0.81
TRIM49-202ENST00000532501 COL4A5P29400 1685 aa10□□□□□ -0.81
TRIM49-202ENST00000532501 SRGAP3O43295 1099 aa9.99□□□□□ -0.81
TRIM49-202ENST00000532501 KLRK1P26718 216 aa9.99□□□□□ -0.81
TRIM49-202ENST00000532501 RPS8P62241 208 aaKnown RBP9.99□□□□□ -0.81
TRIM49-202ENST00000532501 ATP8B2P98198 1209 aa9.99□□□□□ -0.81
TRIM49-202ENST00000532501 MKRN3Q13064 507 aaKnown RBP9.99□□□□□ -0.81
TRIM49-202ENST00000532501 DALRD3Q5D0E6 543 aaKnown RBP9.99□□□□□ -0.81
TRIM49-202ENST00000532501 ATG9AQ7Z3C6 839 aa9.99□□□□□ -0.81
TRIM49-202ENST00000532501 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
TRIM49-202ENST00000532501 SSH3Q8TE77 659 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms