RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 RTL9Q8NET4 1388 aa26.96■■□□□ 1.91
PACSIN3-209ENST00000532457 RIC1Q4ADV7 1423 aa26.95■■□□□ 1.91
PACSIN3-209ENST00000532457 IFIT2P09913 472 aaKnown RBP26.95■■□□□ 1.9
PACSIN3-209ENST00000532457 PI4K2BQ8TCG2 481 aa26.95■■□□□ 1.9
PACSIN3-209ENST00000532457 SEC24BO95487 1268 aa26.94■■□□□ 1.9
PACSIN3-209ENST00000532457 TGFB2P61812 414 aa26.93■■□□□ 1.9
PACSIN3-209ENST00000532457 TIMM10P62072 90 aa26.93■■□□□ 1.9
PACSIN3-209ENST00000532457 TAF1P21675 1872 aa26.93■■□□□ 1.9
PACSIN3-209ENST00000532457 SDSP20132 328 aa26.93■■□□□ 1.9
PACSIN3-209ENST00000532457 CNNM1Q9NRU3 951 aa26.92■■□□□ 1.9
PACSIN3-209ENST00000532457 CEP126Q9P2H0 1117 aa26.92■■□□□ 1.9
PACSIN3-209ENST00000532457 DBNLQ9UJU6 430 aaKnown RBP26.92■■□□□ 1.9
PACSIN3-209ENST00000532457 KIF13BQ9NQT8 1826 aa26.92■■□□□ 1.9
PACSIN3-209ENST00000532457 FHDC1Q9C0D6 1143 aaPredicted RBP26.91■■□□□ 1.9
PACSIN3-209ENST00000532457 GPR108Q9NPR9 543 aa26.91■■□□□ 1.9
PACSIN3-209ENST00000532457 KLRG2A4D1S0 409 aaPredicted RBP26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 H0YIN7 160 aa26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 DBNDD2Q9BQY9 259 aa26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 AOX1Q06278 1338 aa26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 TNRC6CQ9HCJ0 1690 aaKnown RBP26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 VGLL2Q8N8G2 317 aa26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 ECHDC1Q9NTX5 307 aa26.9■■□□□ 1.9
PACSIN3-209ENST00000532457 TTC41PQ6P2S7 1318 aa26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 METTL24Q5JXM2 366 aa26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 HELBQ8NG08 1087 aaPredicted RBP26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 CELF1Q92879 486 aaKnown RBP26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 RBM19Q9Y4C8 960 aaKnown RBP26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 ANKRD31Q8N7Z5 1873 aa26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 MAP4K4O95819 1239 aaPredicted RBP26.88■■□□□ 1.89
PACSIN3-209ENST00000532457 GOLGB1Q14789 3259 aaKnown RBP26.87■■□□□ 1.89
PACSIN3-209ENST00000532457 CRY2Q49AN0 593 aa26.87■■□□□ 1.89
PACSIN3-209ENST00000532457 C2CD5Q86YS7 1000 aa26.87■■□□□ 1.89
PACSIN3-209ENST00000532457 NEUROD6Q96NK8 337 aa26.87■■□□□ 1.89
PACSIN3-209ENST00000532457 MPHOSPH8Q99549 860 aa26.87■■□□□ 1.89
PACSIN3-209ENST00000532457 SYT17Q9BSW7 474 aa26.87■■□□□ 1.89
PACSIN3-209ENST00000532457 A0A1B0GUL7 405 aa26.86■■□□□ 1.89
PACSIN3-209ENST00000532457 RPGRQ92834 1020 aaKnown RBP26.86■■□□□ 1.89
PACSIN3-209ENST00000532457 SRGNP10124 158 aa26.86■■□□□ 1.89
PACSIN3-209ENST00000532457 IGHMBP2P38935 993 aaKnown RBP26.86■■□□□ 1.89
PACSIN3-209ENST00000532457 CDC5LQ99459 802 aaKnown RBP26.86■■□□□ 1.89
PACSIN3-209ENST00000532457 MASTLQ96GX5 879 aa26.85■■□□□ 1.89
PACSIN3-209ENST00000532457 ZNF609O15014 1411 aa26.85■■□□□ 1.89
PACSIN3-209ENST00000532457 SNAP23O00161 211 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 PDE8BO95263 885 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 NPR1P16066 1061 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 ADORA1P30542 326 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 TBC1D9Q6ZT07 1266 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 ANKRD18AQ8IVF6 992 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 SPEF2Q9C093 1822 aa26.84■■□□□ 1.89
PACSIN3-209ENST00000532457 TAF5LO75529 589 aa26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 GLRX3O76003 335 aaKnown RBP26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 MROH5Q6ZUA9 1318 aa26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 A0A0G2JLW4 131 aa26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 DPEP1P16444 411 aa26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 CHRNA5P30532 468 aa26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 RPS8P62241 208 aaKnown RBP26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 DDX46Q7L014 1031 aaKnown RBP26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 RBM17Q96I25 401 aaKnown RBP26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 BSDC1Q9NW68 430 aaPredicted RBP26.83■■□□□ 1.89
PACSIN3-209ENST00000532457 ALDH1B1P30837 517 aa26.82■■□□□ 1.88
PACSIN3-209ENST00000532457 STYK1Q6J9G0 422 aa26.82■■□□□ 1.88
PACSIN3-209ENST00000532457 ZNF622Q969S3 477 aaKnown RBP eCLIP26.82■■□□□ 1.88
PACSIN3-209ENST00000532457 GPATCH3Q96I76 525 aa26.82■■□□□ 1.88
PACSIN3-209ENST00000532457 BOLA2Q9H3K6 86 aa26.82■■□□□ 1.88
PACSIN3-209ENST00000532457 AKAP2Q9Y2D5 859 aa26.82■■□□□ 1.88
PACSIN3-209ENST00000532457 WTIPA6NIX2 430 aaPredicted RBP26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 TRIM6-TRIM34B2RNG4 842 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 ERC2O15083 957 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 SLC51AQ86UW1 340 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 RILPL2Q969X0 211 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 XAGE2Q96GT9 111 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 FGFR2P21802 821 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 HOXA10P31260 410 aaPredicted RBP26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 CHRNDQ07001 517 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 ATP2B3Q16720 1220 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 NLGN2Q8NFZ4 835 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 PIM2Q9P1W9 311 aa26.81■■□□□ 1.88
PACSIN3-209ENST00000532457 CDC45O75419 566 aa26.8■■□□□ 1.88
PACSIN3-209ENST00000532457 ATP5JP18859 108 aa26.8■■□□□ 1.88
PACSIN3-209ENST00000532457 CNKSR1Q969H4 720 aa26.8■■□□□ 1.88
PACSIN3-209ENST00000532457 MINPP1Q9UNW1 487 aa26.8■■□□□ 1.88
PACSIN3-209ENST00000532457 KCNA3P22001 575 aa26.79■■□□□ 1.88
PACSIN3-209ENST00000532457 CRAMP1Q96RY5 1269 aa26.79■■□□□ 1.88
PACSIN3-209ENST00000532457 NDUFB9Q9Y6M9 179 aa26.79■■□□□ 1.88
PACSIN3-209ENST00000532457 COL11A2P13942 1736 aaPredicted RBP26.77■■□□□ 1.88
PACSIN3-209ENST00000532457 TTLL6Q8N841 843 aa26.77■■□□□ 1.88
PACSIN3-209ENST00000532457 KIAA1551Q9HCM1 1747 aa26.77■■□□□ 1.88
PACSIN3-209ENST00000532457 DLEC1Q9Y238 1755 aa26.77■■□□□ 1.88
PACSIN3-209ENST00000532457 EDC3Q96F86 508 aaKnown RBP26.76■■□□□ 1.88
PACSIN3-209ENST00000532457 GRAPQ13588 217 aa26.76■■□□□ 1.87
PACSIN3-209ENST00000532457 PUM3Q15397 648 aaKnown RBP26.76■■□□□ 1.87
PACSIN3-209ENST00000532457 GRAPLQ8TC17 118 aaPredicted RBP26.76■■□□□ 1.87
PACSIN3-209ENST00000532457 DALRD3Q5D0E6 543 aaKnown RBP26.74■■□□□ 1.87
PACSIN3-209ENST00000532457 LPIN2Q92539 896 aa26.74■■□□□ 1.87
PACSIN3-209ENST00000532457 BBOX1O75936 387 aa26.74■■□□□ 1.87
PACSIN3-209ENST00000532457 CHMLP26374 656 aa26.74■■□□□ 1.87
PACSIN3-209ENST00000532457 HAUS7Q99871 368 aa26.74■■□□□ 1.87
PACSIN3-209ENST00000532457 CNTROBQ8N137 903 aa26.72■■□□□ 1.87
PACSIN3-209ENST00000532457 MFAP1P55081 439 aaKnown RBP26.72■■□□□ 1.87
PACSIN3-209ENST00000532457 SCARF1Q14162 830 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms