RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
KNL1-209ENST00000532347 GAS6Q14393 721 aa12.26□□□□□ -0.45
KNL1-209ENST00000532347 RAB44Q7Z6P3 723 aaPredicted RBP12.26□□□□□ -0.45
KNL1-209ENST00000532347 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
KNL1-209ENST00000532347 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
KNL1-209ENST00000532347 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
KNL1-209ENST00000532347 TNFRSF21O75509 655 aa12.25□□□□□ -0.45
KNL1-209ENST00000532347 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
KNL1-209ENST00000532347 C2CD2LO14523 706 aa12.24□□□□□ -0.45
KNL1-209ENST00000532347 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
KNL1-209ENST00000532347 ORC1Q13415 861 aa12.24□□□□□ -0.45
KNL1-209ENST00000532347 COL19A1Q14993 1142 aa12.24□□□□□ -0.45
KNL1-209ENST00000532347 PNMA5Q96PV4 448 aa12.24□□□□□ -0.45
KNL1-209ENST00000532347 ZFATQ9P243 1243 aa12.24□□□□□ -0.45
KNL1-209ENST00000532347 FOXD3Q9UJU5 478 aaPredicted RBP12.24□□□□□ -0.45
KNL1-209ENST00000532347 EPRSP07814 1512 aaKnown RBP12.23□□□□□ -0.45
KNL1-209ENST00000532347 UGGT2Q9NYU1 1516 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 NFKB1P19838 968 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 MX2P20592 715 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 FBXO33Q7Z6M2 555 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 BHMTQ93088 406 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 ABI2Q9NYB9 513 aaPredicted RBP12.23□□□□□ -0.45
KNL1-209ENST00000532347 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
KNL1-209ENST00000532347 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.23□□□□□ -0.45
KNL1-209ENST00000532347 RARAP10276 462 aa12.22□□□□□ -0.45
KNL1-209ENST00000532347 BMP4P12644 408 aa12.22□□□□□ -0.45
KNL1-209ENST00000532347 MAPK8P45983 427 aa12.22□□□□□ -0.45
KNL1-209ENST00000532347 SNX29Q8TEQ0 813 aa12.22□□□□□ -0.45
KNL1-209ENST00000532347 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
KNL1-209ENST00000532347 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
KNL1-209ENST00000532347 NEFLP07196 543 aa12.21□□□□□ -0.45
KNL1-209ENST00000532347 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.45
KNL1-209ENST00000532347 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.45
KNL1-209ENST00000532347 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
KNL1-209ENST00000532347 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
KNL1-209ENST00000532347 MMP20O60882 483 aa12.2□□□□□ -0.46
KNL1-209ENST00000532347 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
KNL1-209ENST00000532347 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
KNL1-209ENST00000532347 COL25A1Q9BXS0 654 aaPredicted RBP12.2□□□□□ -0.46
KNL1-209ENST00000532347 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
KNL1-209ENST00000532347 EIF1AYO14602 144 aaKnown RBP12.19□□□□□ -0.46
KNL1-209ENST00000532347 PHACTR2O75167 634 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 ENOX2Q16206 610 aaKnown RBP12.19□□□□□ -0.46
KNL1-209ENST00000532347 RNFT1Q5M7Z0 435 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 C1orf127Q8N9H9 656 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 CHRDQ9H2X0 955 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
KNL1-209ENST00000532347 PNMA6FA0A0J9YX94 578 aa12.18□□□□□ -0.46
KNL1-209ENST00000532347 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
KNL1-209ENST00000532347 TAGLNQ01995 201 aaKnown RBP12.18□□□□□ -0.46
KNL1-209ENST00000532347 ZNF468Q5VIY5 522 aaPredicted RBP12.18□□□□□ -0.46
KNL1-209ENST00000532347 SYT9Q86SS6 491 aa12.18□□□□□ -0.46
KNL1-209ENST00000532347 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
KNL1-209ENST00000532347 IRF7Q92985 503 aa12.18□□□□□ -0.46
KNL1-209ENST00000532347 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
KNL1-209ENST00000532347 RBM47A0AV96 593 aaKnown RBP12.17□□□□□ -0.46
KNL1-209ENST00000532347 CPNE3O75131 537 aaKnown RBP12.17□□□□□ -0.46
KNL1-209ENST00000532347 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
KNL1-209ENST00000532347 DNAJC25Q9H1X3 360 aa12.17□□□□□ -0.46
KNL1-209ENST00000532347 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
KNL1-209ENST00000532347 PCBP4P57723 403 aaKnown RBP12.16□□□□□ -0.46
KNL1-209ENST00000532347 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 OR13H1Q8NG92 308 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 TLR7Q9NYK1 1049 aaKnown RBP12.16□□□□□ -0.46
KNL1-209ENST00000532347 WWC3Q9ULE0 1092 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 PHLDB1Q86UU1 1377 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
KNL1-209ENST00000532347 ZCCHC11Q5TAX3 1644 aaKnown RBP12.15□□□□□ -0.46
KNL1-209ENST00000532347 HECW2Q9P2P5 1572 aa12.15□□□□□ -0.46
KNL1-209ENST00000532347 EREGO14944 169 aa12.15□□□□□ -0.46
KNL1-209ENST00000532347 DHX32Q7L7V1 743 aaKnown RBP12.15□□□□□ -0.46
KNL1-209ENST00000532347 ZNF428Q96B54 188 aa12.15□□□□□ -0.46
KNL1-209ENST00000532347 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
KNL1-209ENST00000532347 KIAA0556O60303 1618 aa12.15□□□□□ -0.47
KNL1-209ENST00000532347 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
KNL1-209ENST00000532347 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
KNL1-209ENST00000532347 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
KNL1-209ENST00000532347 PSAPP07602 524 aa12.14□□□□□ -0.47
KNL1-209ENST00000532347 ZNF16P17020 682 aaPredicted RBP12.14□□□□□ -0.47
KNL1-209ENST00000532347 CES1P23141 567 aa12.14□□□□□ -0.47
KNL1-209ENST00000532347 KRT76Q01546 638 aa12.14□□□□□ -0.47
KNL1-209ENST00000532347 ARAFP10398 606 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 SOX18P35713 384 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 MAP2K3P46734 347 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 PMEPA1Q969W9 287 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 AVENQ9NQS1 362 aaPredicted RBP12.13□□□□□ -0.47
KNL1-209ENST00000532347 KANSL3Q9P2N6 904 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 KLF15Q9UIH9 416 aa12.13□□□□□ -0.47
KNL1-209ENST00000532347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
KNL1-209ENST00000532347 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
KNL1-209ENST00000532347 SIN3BO75182 1162 aa12.12□□□□□ -0.47
KNL1-209ENST00000532347 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
KNL1-209ENST00000532347 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms