RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 FBXO41Q8TF61 875 aa18.27■□□□□ 0.51
SRPRA-206ENST00000532259 SLC27A2O14975 620 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 PDE8AO60658 829 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 NIP7Q9Y221 180 aaKnown RBP eCLIP18.26■□□□□ 0.51
SRPRA-206ENST00000532259 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 BAG4O95429 457 aaKnown RBP18.26■□□□□ 0.51
SRPRA-206ENST00000532259 LARGE1O95461 756 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 MCTP1Q6DN14 999 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 CWC22Q9HCG8 908 aaKnown RBP18.26■□□□□ 0.51
SRPRA-206ENST00000532259 CNNM1Q9NRU3 951 aa18.26■□□□□ 0.51
SRPRA-206ENST00000532259 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
SRPRA-206ENST00000532259 CYP2E1P05181 493 aaPredicted RBP18.25■□□□□ 0.51
SRPRA-206ENST00000532259 NUCB2P80303 420 aa18.25■□□□□ 0.51
SRPRA-206ENST00000532259 CUL4AQ13619 759 aa18.25■□□□□ 0.51
SRPRA-206ENST00000532259 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
SRPRA-206ENST00000532259 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
SRPRA-206ENST00000532259 PDRG1Q9NUG6 133 aa18.24■□□□□ 0.51
SRPRA-206ENST00000532259 TTC39AQ5SRH9 613 aa18.24■□□□□ 0.51
SRPRA-206ENST00000532259 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
SRPRA-206ENST00000532259 KCNB2Q92953 911 aa18.24■□□□□ 0.51
SRPRA-206ENST00000532259 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
SRPRA-206ENST00000532259 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
SRPRA-206ENST00000532259 UTP14AQ9BVJ6 771 aaKnown RBP18.23■□□□□ 0.51
SRPRA-206ENST00000532259 MYH3P11055 1940 aa18.23■□□□□ 0.51
SRPRA-206ENST00000532259 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
SRPRA-206ENST00000532259 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
SRPRA-206ENST00000532259 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
SRPRA-206ENST00000532259 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
SRPRA-206ENST00000532259 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 NTSR2O95665 410 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 ZAP70P43403 619 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
SRPRA-206ENST00000532259 LIMCH1Q9UPQ0 1083 aa18.21■□□□□ 0.51
SRPRA-206ENST00000532259 SPATA31A6Q5VVP1 1343 aa18.21■□□□□ 0.51
SRPRA-206ENST00000532259 C3orf67Q6ZVT6 689 aa18.21■□□□□ 0.5
SRPRA-206ENST00000532259 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.5
SRPRA-206ENST00000532259 FBXO3Q9UK99 471 aa18.21■□□□□ 0.5
SRPRA-206ENST00000532259 AFF2P51816 1311 aa18.2■□□□□ 0.5
SRPRA-206ENST00000532259 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
SRPRA-206ENST00000532259 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
SRPRA-206ENST00000532259 MCAMP43121 646 aa18.2■□□□□ 0.5
SRPRA-206ENST00000532259 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
SRPRA-206ENST00000532259 COL4A1P02462 1669 aa18.19■□□□□ 0.5
SRPRA-206ENST00000532259 RREB1Q92766 1687 aa18.19■□□□□ 0.5
SRPRA-206ENST00000532259 PDE8BO95263 885 aa18.19■□□□□ 0.5
SRPRA-206ENST00000532259 COL5A3P25940 1745 aaPredicted RBP18.19■□□□□ 0.5
SRPRA-206ENST00000532259 RPAP1Q9BWH6 1393 aaPredicted RBP18.19■□□□□ 0.5
SRPRA-206ENST00000532259 GOLGA6L22H0YM25 854 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 M0R2C6 588 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 CYP21A2P08686 494 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 NCLP19338 710 aaKnown RBP18.18■□□□□ 0.5
SRPRA-206ENST00000532259 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 CCDC24Q8N4L8 307 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 OSBP2Q969R2 916 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 MAST3O60307 1309 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 WTIPA6NIX2 430 aaPredicted RBP18.18■□□□□ 0.5
SRPRA-206ENST00000532259 PHKA1P46020 1223 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 ZMYM1Q5SVZ6 1142 aa18.18■□□□□ 0.5
SRPRA-206ENST00000532259 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 WASHC4Q2M389 1173 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 BLOC1S2Q6QNY1 142 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 INTS4Q96HW7 963 aaKnown RBP18.17■□□□□ 0.5
SRPRA-206ENST00000532259 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 RNF113AO15541 343 aaKnown RBP18.17■□□□□ 0.5
SRPRA-206ENST00000532259 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
SRPRA-206ENST00000532259 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 LRRC2Q9BYS8 371 aa18.17■□□□□ 0.5
SRPRA-206ENST00000532259 STK3Q13188 491 aa18.16■□□□□ 0.5
SRPRA-206ENST00000532259 ME3Q16798 604 aa18.16■□□□□ 0.5
SRPRA-206ENST00000532259 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
SRPRA-206ENST00000532259 DDX49Q9Y6V7 483 aaKnown RBP18.16■□□□□ 0.5
SRPRA-206ENST00000532259 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
SRPRA-206ENST00000532259 BTAF1O14981 1849 aa18.16■□□□□ 0.5
SRPRA-206ENST00000532259 GNPATO15228 680 aa18.16■□□□□ 0.5
SRPRA-206ENST00000532259 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
SRPRA-206ENST00000532259 DDX60Q8IY21 1712 aaKnown RBP18.15■□□□□ 0.5
SRPRA-206ENST00000532259 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 CLEC17AQ6ZS10 378 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 STOX1Q6ZVD7 989 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
SRPRA-206ENST00000532259 PSMA5P28066 241 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 CCDC102BQ68D86 513 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 PUS7LQ9H0K6 701 aaKnown RBP18.15■□□□□ 0.5
SRPRA-206ENST00000532259 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 TAF1P21675 1872 aa18.15■□□□□ 0.5
SRPRA-206ENST00000532259 BRD1O95696 1058 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms