RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SYNMO15061 1565 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 NBPF7P0C2Y1 421 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-230ENST00000532245 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 FAM13BQ9NYF5 915 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 IGSF1Q8N6C5 1336 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 CLTCL1P53675 1640 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 CAMSAP1Q5T5Y3 1602 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 DHX8Q14562 1220 aaKnown RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 H7C1D1 291 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 MCMDC2Q4G0Z9 681 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 ESR2Q92731 530 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 CNKSR1Q969H4 720 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 EHMT1Q9H9B1 1298 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 SRP68Q9UHB9 627 aaKnown RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 ALKQ9UM73 1620 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 PALLDQ8WX93 1383 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 CCDC194A0A1B0GVG4 234 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 PRAMEF22A3QJZ6 481 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 OFD1O75665 1012 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 RAB3GAP1Q15042 981 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 BIN2Q9UBW5 565 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 RNF17Q9BXT8 1623 aaKnown RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 IFIT1BQ5T764 474 aaKnown RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 NEK1Q96PY6 1258 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 BEGAINQ9BUH8 593 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 RIMS1Q86UR5 1692 aaKnown RBP9.3□□□□□ -0.92
CTNND1-230ENST00000532245 IQGAP3Q86VI3 1631 aa9.3□□□□□ -0.92
CTNND1-230ENST00000532245 CTSWP56202 376 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 GTF2IP78347 998 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 TCP10Q12799 353 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 WTAPQ15007 396 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 LRRC2Q9BYS8 371 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 CEP152O94986 1710 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 RNF113AO15541 343 aaKnown RBP9.29□□□□□ -0.92
CTNND1-230ENST00000532245 C8orf76Q96K31 380 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 WDR33Q9C0J8 1336 aaKnown RBP9.29□□□□□ -0.92
CTNND1-230ENST00000532245 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-230ENST00000532245 TBC1D9Q6ZT07 1266 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 KRT23Q9C075 422 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 PICK1Q9NRD5 415 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 MAP3K15Q6ZN16 1313 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 SDSP20132 328 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 KRT85P78386 507 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 NUCB1Q02818 461 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 NMIQ13287 307 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-230ENST00000532245 SPATA31A6Q5VVP1 1343 aa9.29□□□□□ -0.92
CTNND1-230ENST00000532245 METAP2P50579 478 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNND1-230ENST00000532245 NAP1L1P55209 391 aaKnown RBP9.29□□□□□ -0.92
CTNND1-230ENST00000532245 MBD4O95243 580 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 IL6STP40189 918 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-230ENST00000532245 DLGAP5Q15398 846 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 ZFYVE27Q5T4F4 411 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 DBNDD2Q9BQY9 259 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 NAT10Q9H0A0 1025 aaKnown RBP9.28□□□□□ -0.92
CTNND1-230ENST00000532245 MAGEC2Q9UBF1 373 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-230ENST00000532245 SAMM50Q9Y512 469 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 HDAC1Q13547 482 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-230ENST00000532245 SPATA32Q96LK8 384 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 BACH2Q9BYV9 841 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 MMP10P09238 476 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 LIG1P18858 919 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 MCM5P33992 734 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 IARSP41252 1262 aaKnown RBP9.28□□□□□ -0.92
CTNND1-230ENST00000532245 TNNI3KQ59H18 835 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 TCEANC2Q96MN5 208 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 MPHOSPH6Q99547 160 aaKnown RBP9.28□□□□□ -0.92
CTNND1-230ENST00000532245 SLC26A6Q9BXS9 759 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 FPGT-TNNI3KV9GXZ4 949 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 CDC42BPGQ6DT37 1551 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 KCNQ2O43526 872 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 PROSER3Q2NL68 480 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 TTC6Q86TZ1 520 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 PDILTQ8N807 584 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 WDR66Q8TBY9 1149 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 LPIN2Q92539 896 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 ARHGEF40Q8TER5 1519 aa9.28□□□□□ -0.92
CTNND1-230ENST00000532245 ZYXQ15942 572 aaKnown RBP9.27□□□□□ -0.92
CTNND1-230ENST00000532245 PPP4R3AQ6IN85 833 aa9.27□□□□□ -0.92
CTNND1-230ENST00000532245 AATFQ9NY61 560 aaKnown RBP eCLIP9.27□□□□□ -0.92
CTNND1-230ENST00000532245 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-230ENST00000532245 MAST3O60307 1309 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 CYP27B1O15528 508 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 GNAT2P19087 354 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-230ENST00000532245 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 CEP131Q9UPN4 1083 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 MROH5Q6ZUA9 1318 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 DEKP35659 375 aaKnown RBP9.27□□□□□ -0.93
CTNND1-230ENST00000532245 PPEF1O14829 653 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-230ENST00000532245 BMP2KLQ5H9B9 411 aa9.27□□□□□ -0.93
CTNND1-230ENST00000532245 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms