RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 DEFB115Q30KQ5 88 aa16.78■□□□□ 0.28
SF3B2-212ENST00000531589 CCDC85AQ96PX6 553 aaPredicted RBP16.78■□□□□ 0.28
SF3B2-212ENST00000531589 DBNDD1Q9H9R9 158 aa16.78■□□□□ 0.28
SF3B2-212ENST00000531589 ABT1Q9ULW3 272 aaKnown RBP16.78■□□□□ 0.28
SF3B2-212ENST00000531589 RASSF10A6NK89 507 aa16.77■□□□□ 0.28
SF3B2-212ENST00000531589 ECE2O60344 883 aa16.77■□□□□ 0.28
SF3B2-212ENST00000531589 UFL1O94874 794 aa16.77■□□□□ 0.28
SF3B2-212ENST00000531589 EXOSC9Q06265 439 aaKnown RBP16.77■□□□□ 0.28
SF3B2-212ENST00000531589 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.28
SF3B2-212ENST00000531589 DNAAF4Q8WXU2 420 aa16.77■□□□□ 0.28
SF3B2-212ENST00000531589 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
SF3B2-212ENST00000531589 XDHP47989 1333 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 H7C1W4 665 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 PSMD14O00487 310 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 VEGFBP49765 207 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 GCKRQ14397 625 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 MICALL2Q8IY33 904 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
SF3B2-212ENST00000531589 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
SF3B2-212ENST00000531589 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
SF3B2-212ENST00000531589 BSDC1Q9NW68 430 aaPredicted RBP16.75■□□□□ 0.27
SF3B2-212ENST00000531589 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
SF3B2-212ENST00000531589 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
SF3B2-212ENST00000531589 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
SF3B2-212ENST00000531589 AIDAQ96BJ3 306 aa16.74■□□□□ 0.27
SF3B2-212ENST00000531589 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
SF3B2-212ENST00000531589 GREM2Q9H772 168 aa16.74■□□□□ 0.27
SF3B2-212ENST00000531589 TRAF5O00463 557 aa16.73■□□□□ 0.27
SF3B2-212ENST00000531589 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
SF3B2-212ENST00000531589 ECE1P42892 770 aa16.73■□□□□ 0.27
SF3B2-212ENST00000531589 COL13A1Q5TAT6 717 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-212ENST00000531589 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
SF3B2-212ENST00000531589 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-212ENST00000531589 WDR33Q9C0J8 1336 aaKnown RBP16.72■□□□□ 0.27
SF3B2-212ENST00000531589 COL4A1P02462 1669 aa16.72■□□□□ 0.27
SF3B2-212ENST00000531589 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
SF3B2-212ENST00000531589 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
SF3B2-212ENST00000531589 MAP2K1Q02750 393 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-212ENST00000531589 CST9Q5W186 159 aa16.71■□□□□ 0.27
SF3B2-212ENST00000531589 PAXIP1Q6ZW49 1069 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-212ENST00000531589 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
SF3B2-212ENST00000531589 MPHOSPH8Q99549 860 aa16.71■□□□□ 0.27
SF3B2-212ENST00000531589 GLIS2Q9BZE0 524 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-212ENST00000531589 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.27
SF3B2-212ENST00000531589 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
SF3B2-212ENST00000531589 TLL2Q9Y6L7 1015 aa16.71■□□□□ 0.27
SF3B2-212ENST00000531589 CELF2O95319 508 aaKnown RBP16.7■□□□□ 0.26
SF3B2-212ENST00000531589 ITGA6P23229 1130 aa16.7■□□□□ 0.26
SF3B2-212ENST00000531589 FMR1Q06787 632 aaKnown RBP eCLIP16.7■□□□□ 0.266e-7■■□□□ 11.7
SF3B2-212ENST00000531589 SAMD7Q7Z3H4 446 aa16.7■□□□□ 0.26
SF3B2-212ENST00000531589 TNS4Q8IZW8 715 aa16.7■□□□□ 0.26
SF3B2-212ENST00000531589 AGBL3Q8NEM8 1001 aa16.7■□□□□ 0.26
SF3B2-212ENST00000531589 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
SF3B2-212ENST00000531589 ANKRD2Q9GZV1 360 aa16.7■□□□□ 0.26
SF3B2-212ENST00000531589 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
SF3B2-212ENST00000531589 LEMD3Q9Y2U8 911 aa16.7■□□□□ 0.26
SF3B2-212ENST00000531589 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
SF3B2-212ENST00000531589 MED23Q9ULK4 1368 aa16.69■□□□□ 0.26
SF3B2-212ENST00000531589 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
SF3B2-212ENST00000531589 CSF1RP07333 972 aa16.69■□□□□ 0.26
SF3B2-212ENST00000531589 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
SF3B2-212ENST00000531589 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
SF3B2-212ENST00000531589 RSBN1LQ6PCB5 846 aaPredicted RBP16.69■□□□□ 0.26
SF3B2-212ENST00000531589 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
SF3B2-212ENST00000531589 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 CTCFP49711 727 aaPredicted RBP16.68■□□□□ 0.26
SF3B2-212ENST00000531589 CASP7P55210 303 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 RBM26Q5T8P6 1007 aaKnown RBP16.68■□□□□ 0.26
SF3B2-212ENST00000531589 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 CAPNS2Q96L46 248 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 WBP1LQ9NX94 342 aa16.68■□□□□ 0.26
SF3B2-212ENST00000531589 F6X3S4 739 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 KRT26Q7Z3Y9 468 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 SAPCD2Q86UD0 394 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 PCNTO95613 3336 aa16.67■□□□□ 0.26
SF3B2-212ENST00000531589 ZNF609O15014 1411 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 FOXN1O15353 648 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 USP17L8P0C7I0 530 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
SF3B2-212ENST00000531589 GRM1Q13255 1194 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
SF3B2-212ENST00000531589 CYP4F22Q6NT55 531 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 C9orf78Q9NZ63 289 aaPredicted RBP16.66■□□□□ 0.26
SF3B2-212ENST00000531589 MYH3P11055 1940 aa16.66■□□□□ 0.26
SF3B2-212ENST00000531589 GRM8O00222 908 aa16.65■□□□□ 0.26
SF3B2-212ENST00000531589 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
SF3B2-212ENST00000531589 MAP2K2P36507 400 aa16.65■□□□□ 0.26
SF3B2-212ENST00000531589 KCNJ4P48050 445 aa16.65■□□□□ 0.26
SF3B2-212ENST00000531589 SULF1Q8IWU6 871 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms