RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 TRAPPC3LQ5T215 181 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 HSCBQ8IWL3 235 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 XAGE2Q96GT9 111 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 ZNF512BQ96KM6 892 aaPredicted RBP13.23□□□□□ -0.29
SRPRA-205ENST00000531104 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 ANTXR1Q9H6X2 564 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 ANO2Q9NQ90 1003 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 COL4A1P02462 1669 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 PDE8BO95263 885 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
SRPRA-205ENST00000531104 MCCP23508 829 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 ADORA1P30542 326 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
SRPRA-205ENST00000531104 ATP2B3Q16720 1220 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
SRPRA-205ENST00000531104 PROM2Q8N271 834 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
SRPRA-205ENST00000531104 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
SRPRA-205ENST00000531104 PLSCR1O15162 318 aa13.21□□□□□ -0.29
SRPRA-205ENST00000531104 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
SRPRA-205ENST00000531104 FAM227BQ96M60 508 aa13.21□□□□□ -0.29
SRPRA-205ENST00000531104 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
SRPRA-205ENST00000531104 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
SRPRA-205ENST00000531104 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 A0A0D9SFI3 127 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
SRPRA-205ENST00000531104 SSFA2P28290 1259 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 RXRBP28702 533 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 RFC4P35249 363 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 DDIT3P35638 169 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 PTH1RQ03431 593 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
SRPRA-205ENST00000531104 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
SRPRA-205ENST00000531104 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
SRPRA-205ENST00000531104 K7ELQ4 463 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-205ENST00000531104 IGHMBP2P38935 993 aaKnown RBP13.19□□□□□ -0.3
SRPRA-205ENST00000531104 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
SRPRA-205ENST00000531104 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
SRPRA-205ENST00000531104 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
SRPRA-205ENST00000531104 LPIN2Q92539 896 aa13.19□□□□□ -0.3
SRPRA-205ENST00000531104 MAP4K1Q92918 833 aa13.19□□□□□ -0.3
SRPRA-205ENST00000531104 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
SRPRA-205ENST00000531104 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
SRPRA-205ENST00000531104 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
SRPRA-205ENST00000531104 CCDC171Q6TFL3 1326 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
SRPRA-205ENST00000531104 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 ARID4AP29374 1257 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-205ENST00000531104 NFIXQ14938 502 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 TTC39AQ5SRH9 613 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 TPTE2Q6XPS3 522 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
SRPRA-205ENST00000531104 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-205ENST00000531104 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
SRPRA-205ENST00000531104 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
SRPRA-205ENST00000531104 GOLIM4O00461 696 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 GYS1P13807 737 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 TM4SF1P30408 202 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 SCARF1Q14162 830 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 BSDC1Q9NW68 430 aaPredicted RBP13.17□□□□□ -0.3
SRPRA-205ENST00000531104 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
SRPRA-205ENST00000531104 TNRC6CQ9HCJ0 1690 aaKnown RBP13.17□□□□□ -0.3
SRPRA-205ENST00000531104 ST18O60284 1047 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 TAF5LO75529 589 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 PHF14O94880 888 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 SLC5A1P13866 664 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
SRPRA-205ENST00000531104 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
SRPRA-205ENST00000531104 ZBTB22O15209 634 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
SRPRA-205ENST00000531104 MCAMP43121 646 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 ZAP70P43403 619 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 MCM2P49736 904 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 CHRNDQ07001 517 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 CCDC102BQ68D86 513 aa13.15□□□□□ -0.3
SRPRA-205ENST00000531104 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
SRPRA-205ENST00000531104 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms