RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 SLC52A2Q9HAB3 445 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 SPDYE4A6NLX3 237 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 A1BGP04217 495 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 USP8P40818 1118 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 GNAQP50148 359 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 CCDC24Q8N4L8 307 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 PTPRTO14522 1441 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 TSPY2A6NKD2 308 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 RIMBP2O15034 1052 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-225ENST00000530094 HOOK3Q86VS8 718 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 KDM5CP41229 1560 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 IARSP41252 1262 aaKnown RBP9.73□□□□□ -0.85
CTNND1-225ENST00000530094 TMEM67Q5HYA8 995 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 VSIG10Q8N0Z9 540 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 CAVIN2O95810 425 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 TOP1P11387 765 aaKnown RBP9.73□□□□□ -0.85
CTNND1-225ENST00000530094 CNNM3Q8NE01 707 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 HELBQ8NG08 1087 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-225ENST00000530094 ALS2CR12Q96Q35 445 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 POTEB2H3BUK9 544 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 MCM4P33991 863 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 BRINP3Q76B58 766 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 GTPBP4Q9BZE4 634 aaKnown RBP9.73□□□□□ -0.85
CTNND1-225ENST00000530094 CENPHQ9H3R5 247 aa9.73□□□□□ -0.85
CTNND1-225ENST00000530094 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 GOLGA6L10A0A0M3HER8 536 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 ALDH1L1O75891 902 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 IFI16Q16666 785 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 NAA15Q9BXJ9 866 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 CASQ1P31415 396 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 PAFAH1B1P43034 410 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 ATP2B3Q16720 1220 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 MSL1Q68DK7 614 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 ARHGAP45Q92619 1136 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 CRACR2AQ9BSW2 395 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 GOLGA6L9A6NEM1 432 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 NF2P35240 595 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 GSDMDP57764 484 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 TSHZ3Q63HK5 1081 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
CTNND1-225ENST00000530094 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
CTNND1-225ENST00000530094 TRIM37O94972 964 aa9.71□□□□□ -0.85
CTNND1-225ENST00000530094 KIF1BO60333 1816 aa9.71□□□□□ -0.85
CTNND1-225ENST00000530094 PLCG2P16885 1265 aa9.71□□□□□ -0.85
CTNND1-225ENST00000530094 OGFOD1Q8N543 542 aa9.71□□□□□ -0.85
CTNND1-225ENST00000530094 UBXN4Q92575 508 aa9.71□□□□□ -0.85
CTNND1-225ENST00000530094 FAM89AQ96GI7 184 aa9.71□□□□□ -0.85
CTNND1-225ENST00000530094 TBCAO75347 108 aaKnown RBP9.71□□□□□ -0.86
CTNND1-225ENST00000530094 METAP2P50579 478 aaKnown RBP eCLIP9.71□□□□□ -0.86
CTNND1-225ENST00000530094 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.86
CTNND1-225ENST00000530094 FAM177A1Q8N128 213 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-225ENST00000530094 DDX21Q9NR30 783 aaKnown RBP eCLIP9.71□□□□□ -0.864e-6■□□□□ 11.2
CTNND1-225ENST00000530094 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.86
CTNND1-225ENST00000530094 LUZP1Q86V48 1076 aa9.71□□□□□ -0.86
CTNND1-225ENST00000530094 PABPN1LA6NDY0 278 aaKnown RBP9.71□□□□□ -0.86
CTNND1-225ENST00000530094 HCLS1P14317 486 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-225ENST00000530094 MTIF2P46199 727 aaKnown RBP9.71□□□□□ -0.86
CTNND1-225ENST00000530094 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 MCM5P33992 734 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 ZSCAN16Q9H4T2 348 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 PA2G4Q9UQ80 394 aaKnown RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 ARAP3Q8WWN8 1544 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 KIF4AO95239 1232 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 CTNNA2P26232 953 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 CHMP4BP1P59074 171 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 STX1AQ16623 288 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 SYCP3Q8IZU3 236 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 NUP88Q99567 741 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 GNAT2P19087 354 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 ZNF496Q96IT1 587 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 USP16Q9Y5T5 823 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 SOS1Q07889 1333 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 PRR36Q9H6K5 1346 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 VAMP4O75379 141 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 UBA7P41226 1012 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 EHBP1Q8NDI1 1231 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 NEK1Q96PY6 1258 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-225ENST00000530094 JAG2Q9Y219 1238 aa9.7□□□□□ -0.86
CTNND1-225ENST00000530094 CALM1P0DP23 149 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 CALM2P0DP24 149 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 CALM3P0DP25 149 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 A2ML1A8K2U0 1454 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 SPATA31E1Q6ZUB1 1445 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 PTPN14Q15678 1187 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 DYDC1Q8WWB3 177 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 ESR2Q92731 530 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
CTNND1-225ENST00000530094 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms