RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 TMA7Q9Y2S6 64 aaKnown RBP9.56□□□□□ -0.88
CAPRIN1-208ENST00000530008 CDK11BP21127 795 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 MAP3K10Q02779 954 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 PWP1Q13610 501 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 KRT25Q7Z3Z0 450 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 RELL1Q8IUW5 271 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 OR13H1Q8NG92 308 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 PIF1Q9H611 641 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 ZSWIM4Q9H7M6 989 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 ADAMTS1Q9UHI8 967 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 SALL4Q9UJQ4 1053 aa9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 CDK11AQ9UQ88 783 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-208ENST00000530008 PHF20L1A8MW92 1017 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 MMP20O60882 483 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 CCINQ13939 588 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 EFHC2Q5JST6 749 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 ANKRD24Q8TF21 1146 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 GAS2L1Q99501 681 aaPredicted RBP9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 GSX2Q9BZM3 304 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 OSBPL2Q9H1P3 480 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 PPM1HQ9ULR3 514 aa9.54□□□□□ -0.88
CAPRIN1-208ENST00000530008 TMEM238LA0A1B0GVL6 79 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 TLDC2A0PJX2 215 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 XRCC5P13010 732 aaKnown RBP9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 MMRN1Q13201 1228 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 SEC16BQ96JE7 1060 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 LIN7BQ9HAP6 207 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 ABCB6Q9NP58 842 aa9.53□□□□□ -0.88
CAPRIN1-208ENST00000530008 MINDY4BA8MYZ0 360 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 F6X3S4 739 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 FAM157BP0CG42 384 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 BMP1P13497 986 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 GBP2P32456 591 aaPredicted RBP9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 LBRQ14739 615 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 DTHD1Q6ZMT9 781 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 TMEM74Q96NL1 305 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 AKAP2Q9Y2D5 859 aa9.52□□□□□ -0.89
CAPRIN1-208ENST00000530008 ATXN7O15265 892 aaPredicted RBP9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 EFSO43281 561 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 RARAP10276 462 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 RLBP1P12271 317 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 EIF4A3P38919 411 aaKnown RBP9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 SV2BQ7L1I2 683 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 TRIM46Q7Z4K8 759 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 TCF12Q99081 682 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 ZFATQ9P243 1243 aa9.51□□□□□ -0.89
CAPRIN1-208ENST00000530008 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
CAPRIN1-208ENST00000530008 FIGNL1Q6PIW4 674 aa9.5□□□□□ -0.89
CAPRIN1-208ENST00000530008 DNMT3LQ9UJW3 386 aa9.5□□□□□ -0.89
CAPRIN1-208ENST00000530008 ANKRD62A6NC57 917 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 PPM1GO15355 546 aaPredicted RBP9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 FBXO24O75426 580 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 SSBP05455 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 NASPP49321 788 aaPredicted RBP9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 NCAPG2Q86XI2 1143 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 CCNJLQ8IV13 435 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 ZNF296Q8WUU4 475 aaPredicted RBP9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 ZKSCAN3Q9BRR0 538 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 TBX22Q9Y458 520 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 PCDHGC4Q9Y5F7 938 aa9.49□□□□□ -0.89
CAPRIN1-208ENST00000530008 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 DCDC2BA2VCK2 349 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 KIF4AO95239 1232 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 AVPP01185 164 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 PSAPP07602 524 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 THBS1P07996 1170 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 HYAL2Q12891 473 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 LAMC2Q13753 1193 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 BMS1Q14692 1282 aaKnown RBP9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.891e-6■□□□□ 10.2
CAPRIN1-208ENST00000530008 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 TPTE2Q6XPS3 522 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 RHOVQ96L33 236 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 ZFP42Q96MM3 310 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 PNMA5Q96PV4 448 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 OSMRQ99650 979 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 ZFYVE1Q9HBF4 777 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 TLR7Q9NYK1 1049 aaKnown RBP9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 EFR3BQ9Y2G0 817 aa9.48□□□□□ -0.89
CAPRIN1-208ENST00000530008 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 ACPPP15309 386 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 NFKB1P19838 968 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 SOX18P35713 384 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 SDE2Q6IQ49 451 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 PHC3Q8NDX5 983 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 KCNQ5Q9NR82 932 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms