RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 OR13H1Q8NG92 308 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
CTR9-204ENST00000529355 SLC6A14Q9UN76 642 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 CPB1P15086 417 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 ASB16Q96NS5 453 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 SPOCK3Q9BQ16 436 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 LATS2Q9NRM7 1088 aa8.36□□□□□ -1.07
CTR9-204ENST00000529355 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
CTR9-204ENST00000529355 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
CTR9-204ENST00000529355 ELOA3DA6NLF2 546 aaPredicted RBP8.35□□□□□ -1.07
CTR9-204ENST00000529355 TREHO43280 583 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
CTR9-204ENST00000529355 PSAPP07602 524 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 HOXB4P17483 251 aaPredicted RBP8.35□□□□□ -1.07
CTR9-204ENST00000529355 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
CTR9-204ENST00000529355 NEUROD1Q13562 356 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 ELOA3BQ3SY89 546 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 ADAMTSL4Q6UY14 1074 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 ELOA3Q8NG57 546 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 ZFYVE28Q9HCC9 887 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 WWC3Q9ULE0 1092 aa8.35□□□□□ -1.07
CTR9-204ENST00000529355 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 K7ELQ4 463 aaPredicted RBP8.34□□□□□ -1.07
CTR9-204ENST00000529355 PHACTR2O75167 634 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 CES1P23141 567 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 MFAP1P55081 439 aaKnown RBP8.34□□□□□ -1.07
CTR9-204ENST00000529355 SIK1P57059 783 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 EHHADHQ08426 723 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 PLA2G4EQ3MJ16 856 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 NUDT8Q8WV74 236 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 HHIPQ96QV1 700 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 RNF19AQ9NV58 838 aa8.34□□□□□ -1.07
CTR9-204ENST00000529355 EIF1AYO14602 144 aaKnown RBP8.33□□□□□ -1.08
CTR9-204ENST00000529355 ALBP02768 609 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
CTR9-204ENST00000529355 NRLP54845 237 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
CTR9-204ENST00000529355 GPLD1P80108 840 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 ATP11AP98196 1134 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 FAM35AQ86V20 835 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 SALL4Q9UJQ4 1053 aa8.33□□□□□ -1.08
CTR9-204ENST00000529355 BTBD11A6QL63 1104 aa8.32□□□□□ -1.08
CTR9-204ENST00000529355 PI16Q6UXB8 463 aa8.32□□□□□ -1.08
CTR9-204ENST00000529355 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
CTR9-204ENST00000529355 SNX29Q8TEQ0 813 aa8.32□□□□□ -1.08
CTR9-204ENST00000529355 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
CTR9-204ENST00000529355 EIF2AK2P19525 551 aaKnown RBP8.31□□□□□ -1.08
CTR9-204ENST00000529355 SOX18P35713 384 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 MAPK8P45983 427 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
CTR9-204ENST00000529355 PSAPL1Q6NUJ1 521 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 C20orf204Q6ZNR8 217 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 ZSCAN29Q8IWY8 852 aaPredicted RBP8.31□□□□□ -1.08
CTR9-204ENST00000529355 CEP120Q8N960 986 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 ALKBH8Q96BT7 664 aaKnown RBP8.31□□□□□ -1.08
CTR9-204ENST00000529355 CSRNP1Q96S65 589 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
CTR9-204ENST00000529355 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 KIF4AO95239 1232 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 HOXD8P13378 290 aaPredicted RBP8.3□□□□□ -1.08
CTR9-204ENST00000529355 AMPD1P23109 780 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 FMR1Q06787 632 aaKnown RBP eCLIP8.3□□□□□ -1.08
CTR9-204ENST00000529355 NEDD1Q8NHV4 660 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 EPS8L3Q8TE67 593 aaKnown RBP8.3□□□□□ -1.08
CTR9-204ENST00000529355 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
CTR9-204ENST00000529355 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 PODXL2Q9NZ53 605 aa8.3□□□□□ -1.08
CTR9-204ENST00000529355 M0R082 166 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 ALAS2P22557 587 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 HYAL2Q12891 473 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 COL9A3Q14050 684 aaPredicted RBP8.29□□□□□ -1.08
CTR9-204ENST00000529355 NCAPG2Q86XI2 1143 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 ZNF587Q96SQ5 575 aaPredicted RBP8.29□□□□□ -1.08
CTR9-204ENST00000529355 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
CTR9-204ENST00000529355 NFKBIEO00221 500 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 CPNE3O75131 537 aaKnown RBP8.28□□□□□ -1.08
CTR9-204ENST00000529355 ENOX2Q16206 610 aaKnown RBP8.28□□□□□ -1.08
CTR9-204ENST00000529355 GRIK5Q16478 980 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 CCDC74AQ96AQ1 378 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 NPHS2Q9NP85 383 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
CTR9-204ENST00000529355 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms