RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 STIM2Q9P246 746 aa6.93□□□□□ -1.3
TCN1-202ENST00000529251 BIN2Q9UBW5 565 aaPredicted RBP6.93□□□□□ -1.3
TCN1-202ENST00000529251 APBA3O96018 575 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 SOX18P35713 384 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 ZAP70P43403 619 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 DOC2BQ14184 412 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 NOM1Q5C9Z4 860 aaKnown RBP6.92□□□□□ -1.3
TCN1-202ENST00000529251 MSL1Q68DK7 614 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 ELMSAN1Q6PJG2 1045 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
TCN1-202ENST00000529251 FMR1NBQ8N0W7 255 aaPredicted RBP6.92□□□□□ -1.3
TCN1-202ENST00000529251 HELQQ8TDG4 1101 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 CCDC87Q9NVE4 849 aa6.92□□□□□ -1.3
TCN1-202ENST00000529251 ITGB7P26010 798 aa6.91□□□□□ -1.3
TCN1-202ENST00000529251 RAC1P63000 192 aa6.91□□□□□ -1.3
TCN1-202ENST00000529251 FKBP4Q02790 459 aaKnown RBP eCLIP6.91□□□□□ -1.3
TCN1-202ENST00000529251 NLRP13Q86W25 1043 aa6.91□□□□□ -1.3
TCN1-202ENST00000529251 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
TCN1-202ENST00000529251 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
TCN1-202ENST00000529251 NACC1Q96RE7 527 aa6.91□□□□□ -1.3
TCN1-202ENST00000529251 SMG9Q9H0W8 520 aaKnown RBP6.91□□□□□ -1.3
TCN1-202ENST00000529251 LOC102724428A0A0B4J2F2 783 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 A6NHS1 94 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 UBAP1LF5GYI3 381 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 J3QW42 95 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 PSAPP07602 524 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
TCN1-202ENST00000529251 SIK1P57059 783 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 ARHGAP4P98171 946 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 ADGRE1Q14246 886 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.31e-13■■□□□ 14.3
TCN1-202ENST00000529251 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 NSUN5Q96P11 429 aaKnown RBP6.9□□□□□ -1.3
TCN1-202ENST00000529251 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.3
TCN1-202ENST00000529251 EIF1AXP47813 144 aaKnown RBP6.89□□□□□ -1.31
TCN1-202ENST00000529251 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
TCN1-202ENST00000529251 RSPO4Q2I0M5 234 aaPredicted RBP6.89□□□□□ -1.31
TCN1-202ENST00000529251 TMCO4Q5TGY1 634 aa6.89□□□□□ -1.31
TCN1-202ENST00000529251 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
TCN1-202ENST00000529251 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
TCN1-202ENST00000529251 GPR152Q8TDT2 470 aa6.89□□□□□ -1.31
TCN1-202ENST00000529251 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
TCN1-202ENST00000529251 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
TCN1-202ENST00000529251 C9orf172C9J069 976 aa6.88□□□□□ -1.31
TCN1-202ENST00000529251 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
TCN1-202ENST00000529251 NKAPLQ5M9Q1 402 aa6.88□□□□□ -1.31
TCN1-202ENST00000529251 COL13A1Q5TAT6 717 aaPredicted RBP6.88□□□□□ -1.31
TCN1-202ENST00000529251 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
TCN1-202ENST00000529251 WFDC8Q8IUA0 241 aa6.88□□□□□ -1.31
TCN1-202ENST00000529251 FZD6O60353 706 aa6.87□□□□□ -1.31
TCN1-202ENST00000529251 DEAF1O75398 565 aaPredicted RBP6.87□□□□□ -1.31
TCN1-202ENST00000529251 AAMPQ13685 434 aa6.87□□□□□ -1.31
TCN1-202ENST00000529251 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
TCN1-202ENST00000529251 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
TCN1-202ENST00000529251 DNM1Q05193 864 aaKnown RBP6.86□□□□□ -1.31
TCN1-202ENST00000529251 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
TCN1-202ENST00000529251 EDEM1Q92611 657 aa6.86□□□□□ -1.31
TCN1-202ENST00000529251 EGFL7Q9UHF1 273 aa6.86□□□□□ -1.31
TCN1-202ENST00000529251 POLIQ9UNA4 740 aa6.86□□□□□ -1.31
TCN1-202ENST00000529251 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
TCN1-202ENST00000529251 GHRHP01286 108 aa6.85□□□□□ -1.31
TCN1-202ENST00000529251 TXNRD3Q86VQ6 643 aa6.85□□□□□ -1.31
TCN1-202ENST00000529251 NUDT16Q96DE0 195 aaKnown RBP6.85□□□□□ -1.31
TCN1-202ENST00000529251 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
TCN1-202ENST00000529251 SEMA6BQ9H3T3 888 aa6.85□□□□□ -1.31
TCN1-202ENST00000529251 DLL1O00548 723 aa6.84□□□□□ -1.31
TCN1-202ENST00000529251 KIF4AO95239 1232 aa6.84□□□□□ -1.31
TCN1-202ENST00000529251 NPR3P17342 541 aa6.84□□□□□ -1.31
TCN1-202ENST00000529251 MAPK1P28482 360 aa6.84□□□□□ -1.31
TCN1-202ENST00000529251 SF3B2Q13435 895 aaKnown RBP6.84□□□□□ -1.31
TCN1-202ENST00000529251 CCDC27Q2M243 656 aa6.84□□□□□ -1.31
TCN1-202ENST00000529251 PDE12Q6L8Q7 609 aaKnown RBP6.84□□□□□ -1.31
TCN1-202ENST00000529251 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
TCN1-202ENST00000529251 ABI2Q9NYB9 513 aaPredicted RBP6.84□□□□□ -1.31
TCN1-202ENST00000529251 TRIM33Q9UPN9 1127 aa6.84□□□□□ -1.31
TCN1-202ENST00000529251 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
TCN1-202ENST00000529251 DYRK3O43781 588 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 FAM13AO94988 1023 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 CYP2E1P05181 493 aaPredicted RBP6.83□□□□□ -1.32
TCN1-202ENST00000529251 HYAL2Q12891 473 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 TTC39BQ5VTQ0 682 aaPredicted RBP6.83□□□□□ -1.32
TCN1-202ENST00000529251 GDF6Q6KF10 455 aaPredicted RBP6.83□□□□□ -1.32
TCN1-202ENST00000529251 ADAMTSL4Q6UY14 1074 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 IL22RA1Q8N6P7 574 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 ELP3Q9H9T3 547 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 TMEM63CQ9P1W3 806 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 USP21Q9UK80 565 aa6.83□□□□□ -1.32
TCN1-202ENST00000529251 PDGFAP04085 211 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 ATP11AP98196 1134 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
TCN1-202ENST00000529251 SETDB1Q15047 1291 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 IGF2-ASQ6U949 168 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 XKR5Q6UX68 686 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 RBSNQ9H1K0 784 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 CNTN3Q9P232 1028 aa6.82□□□□□ -1.32
TCN1-202ENST00000529251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms