RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SNX29Q8TEQ0 813 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 CHRDQ9H2X0 955 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 IGHA2P01877 340 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 SOX18P35713 384 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 ASB16Q96NS5 453 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 ZFYVE28Q9HCC9 887 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 STARD13Q9Y3M8 1113 aa10.26□□□□□ -0.77
PCF11-202ENST00000528336 EREGO14944 169 aa10.25□□□□□ -0.77
PCF11-202ENST00000528336 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
PCF11-202ENST00000528336 NEFLP07196 543 aa10.25□□□□□ -0.77
PCF11-202ENST00000528336 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
PCF11-202ENST00000528336 NUDT8Q8WV74 236 aa10.25□□□□□ -0.77
PCF11-202ENST00000528336 PMEPA1Q969W9 287 aa10.25□□□□□ -0.77
PCF11-202ENST00000528336 NAGPAQ9UK23 515 aa10.25□□□□□ -0.77
PCF11-202ENST00000528336 GHRHP01286 108 aa10.24□□□□□ -0.77
PCF11-202ENST00000528336 PERM1Q5SV97 790 aa10.24□□□□□ -0.77
PCF11-202ENST00000528336 USPL1Q5W0Q7 1092 aa10.24□□□□□ -0.77
PCF11-202ENST00000528336 PSAPL1Q6NUJ1 521 aa10.24□□□□□ -0.77
PCF11-202ENST00000528336 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
PCF11-202ENST00000528336 ANKRD33BA6NCL7 494 aa10.23□□□□□ -0.77
PCF11-202ENST00000528336 ALBP02768 609 aa10.23□□□□□ -0.77
PCF11-202ENST00000528336 HOXD8P13378 290 aaPredicted RBP10.23□□□□□ -0.77
PCF11-202ENST00000528336 SPACA7Q96KW9 195 aa10.23□□□□□ -0.77
PCF11-202ENST00000528336 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
PCF11-202ENST00000528336 M0R082 166 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 EIF1AYO14602 144 aaKnown RBP10.22□□□□□ -0.77
PCF11-202ENST00000528336 TREHO43280 583 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 DSC3Q14574 896 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 ZNF417Q8TAU3 575 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 ZNF587Q96SQ5 575 aaPredicted RBP10.22□□□□□ -0.77
PCF11-202ENST00000528336 SMG9Q9H0W8 520 aaKnown RBP10.22□□□□□ -0.77
PCF11-202ENST00000528336 SALL4Q9UJQ4 1053 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 AMOTL2Q9Y2J4 779 aa10.22□□□□□ -0.77
PCF11-202ENST00000528336 CPNE3O75131 537 aaKnown RBP10.21□□□□□ -0.77
PCF11-202ENST00000528336 RGS9O75916 674 aaPredicted RBP10.21□□□□□ -0.77
PCF11-202ENST00000528336 MAPK8P45983 427 aa10.21□□□□□ -0.77
PCF11-202ENST00000528336 ALKBH8Q96BT7 664 aaKnown RBP10.21□□□□□ -0.77
PCF11-202ENST00000528336 CSRNP1Q96S65 589 aa10.21□□□□□ -0.77
PCF11-202ENST00000528336 RBSNQ9H1K0 784 aa10.21□□□□□ -0.77
PCF11-202ENST00000528336 JPH1Q9HDC5 661 aaPredicted RBP10.21□□□□□ -0.77
PCF11-202ENST00000528336 ACPPP15309 386 aa10.2□□□□□ -0.78
PCF11-202ENST00000528336 SNRPNP63162 240 aaKnown RBP10.2□□□□□ -0.78
PCF11-202ENST00000528336 KANK3Q6NY19 840 aa10.2□□□□□ -0.78
PCF11-202ENST00000528336 CEP120Q8N960 986 aa10.2□□□□□ -0.78
PCF11-202ENST00000528336 PLD4Q96BZ4 506 aa10.2□□□□□ -0.78
PCF11-202ENST00000528336 LPIN3Q9BQK8 851 aa10.2□□□□□ -0.78
PCF11-202ENST00000528336 TRPA1O75762 1119 aa10.19□□□□□ -0.78
PCF11-202ENST00000528336 KIF4AO95239 1232 aa10.19□□□□□ -0.78
PCF11-202ENST00000528336 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
PCF11-202ENST00000528336 ATP11AP98196 1134 aa10.19□□□□□ -0.78
PCF11-202ENST00000528336 DNAJC14Q6Y2X3 702 aaPredicted RBP10.19□□□□□ -0.78
PCF11-202ENST00000528336 C20orf204Q6ZNR8 217 aa10.19□□□□□ -0.78
PCF11-202ENST00000528336 LATS2Q9NRM7 1088 aa10.19□□□□□ -0.78
PCF11-202ENST00000528336 RASSF4Q9H2L5 321 aa10.18□□□□□ -0.78
PCF11-202ENST00000528336 PNMA6FA0A0J9YX94 578 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 FAM181BA6NEQ2 426 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 LILRB5O75023 590 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 EDN3P14138 238 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 HOXB4P17483 251 aaPredicted RBP10.17□□□□□ -0.78
PCF11-202ENST00000528336 CEP135Q66GS9 1140 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 DNAJC25Q9H1X3 360 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 FRRS1LQ9P0K9 344 aa10.17□□□□□ -0.78
PCF11-202ENST00000528336 CNTNAP5Q8WYK1 1306 aa10.16□□□□□ -0.78
PCF11-202ENST00000528336 P4HBP07237 508 aaKnown RBP10.16□□□□□ -0.78
PCF11-202ENST00000528336 DGKGP49619 791 aa10.16□□□□□ -0.78
PCF11-202ENST00000528336 FMR1Q06787 632 aaKnown RBP eCLIP10.16□□□□□ -0.78
PCF11-202ENST00000528336 GDF6Q6KF10 455 aaPredicted RBP10.16□□□□□ -0.78
PCF11-202ENST00000528336 GALNT12Q8IXK2 581 aa10.16□□□□□ -0.78
PCF11-202ENST00000528336 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
PCF11-202ENST00000528336 OSMRQ99650 979 aa10.16□□□□□ -0.78
PCF11-202ENST00000528336 PBX4Q9BYU1 374 aa10.16□□□□□ -0.78
PCF11-202ENST00000528336 SETDB2Q96T68 719 aa10.15□□□□□ -0.78
PCF11-202ENST00000528336 DZANK1Q9NVP4 752 aa10.15□□□□□ -0.78
PCF11-202ENST00000528336 WWC3Q9ULE0 1092 aa10.15□□□□□ -0.78
PCF11-202ENST00000528336 TRIM33Q9UPN9 1127 aa10.15□□□□□ -0.78
PCF11-202ENST00000528336 SMNDC1O75940 238 aaKnown RBP eCLIP10.14□□□□□ -0.79
PCF11-202ENST00000528336 IRS1P35568 1242 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
PCF11-202ENST00000528336 ENOX2Q16206 610 aaKnown RBP10.14□□□□□ -0.79
PCF11-202ENST00000528336 PEAR1Q5VY43 1037 aaPredicted RBP10.14□□□□□ -0.79
PCF11-202ENST00000528336 PODNQ7Z5L7 613 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 BEND7Q8N7W2 519 aaPredicted RBP10.14□□□□□ -0.79
PCF11-202ENST00000528336 EPS8L3Q8TE67 593 aaKnown RBP10.14□□□□□ -0.79
PCF11-202ENST00000528336 HHIPQ96QV1 700 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 ZKSCAN3Q9BRR0 538 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 MKL2Q9ULH7 1088 aa10.14□□□□□ -0.79
PCF11-202ENST00000528336 GADD45BO75293 160 aaPredicted RBP10.13□□□□□ -0.79
PCF11-202ENST00000528336 LINC00114Q6XXX2 140 aa10.13□□□□□ -0.79
PCF11-202ENST00000528336 NPAS4Q8IUM7 802 aa10.13□□□□□ -0.79
PCF11-202ENST00000528336 TTC9Q92623 222 aa10.13□□□□□ -0.79
PCF11-202ENST00000528336 LACRTQ9GZZ8 138 aa10.13□□□□□ -0.79
PCF11-202ENST00000528336 A0A1W2PP55 124 aa10.12□□□□□ -0.79
PCF11-202ENST00000528336 PDE2AO00408 941 aaPredicted RBP10.12□□□□□ -0.79
PCF11-202ENST00000528336 ATP2B2Q01814 1243 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms