RNA–Protein interactions for RNA: ENST00000527440.1

AP001547.1-201, humanhuman

TSL 3 BASIC

Gene AP001547.1, Length 374 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001547.1-201ENST00000527440 COL4A1P02462 1669 aa18.27■□□□□ 0.52
AP001547.1-201ENST00000527440 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 H7C1D1 291 aa18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 H7C1W4 665 aa18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 GREM2Q9H772 168 aa18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 CNOT7Q9UIV1 285 aaKnown RBP18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
AP001547.1-201ENST00000527440 XDHP47989 1333 aa18.25■□□□□ 0.51
AP001547.1-201ENST00000527440 F6X3S4 739 aa18.25■□□□□ 0.51
AP001547.1-201ENST00000527440 PSMD14O00487 310 aa18.25■□□□□ 0.51
AP001547.1-201ENST00000527440 ABT1Q9ULW3 272 aaKnown RBP18.25■□□□□ 0.51
AP001547.1-201ENST00000527440 LTBP1Q14766 1721 aa18.25■□□□□ 0.51
AP001547.1-201ENST00000527440 IGHMBP2P38935 993 aaKnown RBP18.24■□□□□ 0.51
AP001547.1-201ENST00000527440 MICALL2Q8IY33 904 aa18.24■□□□□ 0.51
AP001547.1-201ENST00000527440 ADAMTSL1Q8N6G6 1762 aa18.23■□□□□ 0.51
AP001547.1-201ENST00000527440 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
AP001547.1-201ENST00000527440 ATP2B4P23634 1241 aa18.23■□□□□ 0.51
AP001547.1-201ENST00000527440 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
AP001547.1-201ENST00000527440 PCNTO95613 3336 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 SHTN1A0MZ66 631 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 TRAF5O00463 557 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
AP001547.1-201ENST00000527440 RTL9Q8NET4 1388 aa18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 ITGA6P23229 1130 aa18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 RPS12P25398 132 aaKnown RBP18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 FAM161AQ3B820 660 aa18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 PAXIP1Q6ZW49 1069 aaPredicted RBP18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 TRPM4Q8TD43 1214 aa18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 DPF2Q92785 391 aa18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
AP001547.1-201ENST00000527440 DEFB115Q30KQ5 88 aa18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 BEND3Q5T5X7 828 aa18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 RBM26Q5T8P6 1007 aaKnown RBP18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 SAMD7Q7Z3H4 446 aa18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
AP001547.1-201ENST00000527440 E9PSI1 815 aa18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 VEGFBP49765 207 aa18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 CASP7P55210 303 aa18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 ZC3H15Q8WU90 426 aaKnown RBP18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 ZNF408Q9H9D4 720 aa18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
AP001547.1-201ENST00000527440 ANKRD18BA2A2Z9 1011 aa18.18■□□□□ 0.5
AP001547.1-201ENST00000527440 KCNJ4P48050 445 aa18.18■□□□□ 0.5
AP001547.1-201ENST00000527440 CCT4P50991 539 aaKnown RBP18.18■□□□□ 0.5
AP001547.1-201ENST00000527440 GRM1Q13255 1194 aa18.18■□□□□ 0.5
AP001547.1-201ENST00000527440 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
AP001547.1-201ENST00000527440 WTIPA6NIX2 430 aaPredicted RBP18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 CELF2O95319 508 aaKnown RBP18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 CSF1RP07333 972 aa18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 VIL1P09327 827 aaKnown RBP18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 SRCIN1Q9C0H9 1055 aa18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 ANKRD2Q9GZV1 360 aa18.17■□□□□ 0.5
AP001547.1-201ENST00000527440 RASSF10A6NK89 507 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 GRM8O00222 908 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 TAF7LQ5H9L4 462 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 RSBN1LQ6PCB5 846 aaPredicted RBP18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 PODNQ7Z5L7 613 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 AIDAQ96BJ3 306 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 PGAP2Q9UHJ9 254 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 MED23Q9ULK4 1368 aa18.16■□□□□ 0.5
AP001547.1-201ENST00000527440 USP17L3A6NCW0 530 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 USP17L4A6NCW7 530 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 KIF4BQ2VIQ3 1234 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 CST9Q5W186 159 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 USP17L1Q7RTZ2 530 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 USP48Q86UV5 1035 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 DCPSQ96C86 337 aaKnown RBP18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 LEMD3Q9Y2U8 911 aa18.15■□□□□ 0.5
AP001547.1-201ENST00000527440 ALDH1L1O75891 902 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 EGFRP00533 1210 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 FOXO4P98177 505 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 CCDC57Q2TAC2 916 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 COL13A1Q5TAT6 717 aaPredicted RBP18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 KRT26Q7Z3Y9 468 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 ZNF804BA4D1E1 1349 aa18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 WDR33Q9C0J8 1336 aaKnown RBP18.14■□□□□ 0.49
AP001547.1-201ENST00000527440 CHRNDQ07001 517 aa18.13■□□□□ 0.49
AP001547.1-201ENST00000527440 SLFN5Q08AF3 891 aa18.13■□□□□ 0.49
AP001547.1-201ENST00000527440 AGBL3Q8NEM8 1001 aa18.13■□□□□ 0.49
AP001547.1-201ENST00000527440 COA1Q9GZY4 146 aa18.13■□□□□ 0.49
AP001547.1-201ENST00000527440 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
AP001547.1-201ENST00000527440 USP17L8P0C7I0 530 aa18.12■□□□□ 0.49
AP001547.1-201ENST00000527440 ECE1P42892 770 aa18.12■□□□□ 0.49
AP001547.1-201ENST00000527440 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
AP001547.1-201ENST00000527440 CDCA7LQ96GN5 454 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms