RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 COL9A3Q14050 684 aaPredicted RBP10.1□□□□□ -0.79
ATM-211ENST00000527389 PERM1Q5SV97 790 aa10.1□□□□□ -0.79
ATM-211ENST00000527389 PSAPL1Q6NUJ1 521 aa10.1□□□□□ -0.79
ATM-211ENST00000527389 SNX29Q8TEQ0 813 aa10.1□□□□□ -0.79
ATM-211ENST00000527389 TTC9Q92623 222 aa10.1□□□□□ -0.79
ATM-211ENST00000527389 NSUN5Q96P11 429 aaKnown RBP10.1□□□□□ -0.79
ATM-211ENST00000527389 CNTN3Q9P232 1028 aa10.1□□□□□ -0.79
ATM-211ENST00000527389 DCTN4Q9UJW0 460 aa10.1□□□□□ -0.79
ATM-211ENST00000527389 PIK3R2O00459 728 aa10.09□□□□□ -0.79
ATM-211ENST00000527389 CYP2E1P05181 493 aaPredicted RBP10.09□□□□□ -0.79
ATM-211ENST00000527389 CPB1P15086 417 aa10.09□□□□□ -0.79
ATM-211ENST00000527389 COL13A1Q5TAT6 717 aaPredicted RBP10.09□□□□□ -0.79
ATM-211ENST00000527389 C1orf127Q8N9H9 656 aa10.09□□□□□ -0.79
ATM-211ENST00000527389 CHRDQ9H2X0 955 aa10.09□□□□□ -0.79
ATM-211ENST00000527389 GNB5O14775 395 aa10.08□□□□□ -0.8
ATM-211ENST00000527389 HYAL2Q12891 473 aa10.08□□□□□ -0.8
ATM-211ENST00000527389 PMEPA1Q969W9 287 aa10.08□□□□□ -0.8
ATM-211ENST00000527389 J3QW42 95 aa10.07□□□□□ -0.8
ATM-211ENST00000527389 LILRB5O75023 590 aa10.07□□□□□ -0.8
ATM-211ENST00000527389 NID1P14543 1247 aa10.07□□□□□ -0.8
ATM-211ENST00000527389 EIF2AK2P19525 551 aaKnown RBP10.07□□□□□ -0.8
ATM-211ENST00000527389 KCNMA1Q12791 1236 aa10.07□□□□□ -0.8
ATM-211ENST00000527389 HFE2Q6ZVN8 426 aa10.07□□□□□ -0.8
ATM-211ENST00000527389 SALL4Q9UJQ4 1053 aa10.07□□□□□ -0.8
ATM-211ENST00000527389 FOXD3Q9UJU5 478 aaPredicted RBP10.07□□□□□ -0.8
ATM-211ENST00000527389 PHACTR2O75167 634 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 RGS9O75916 674 aaPredicted RBP10.06□□□□□ -0.8
ATM-211ENST00000527389 GHRHP01286 108 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 GSK3AP49840 483 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 GRIK5Q16478 980 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 ELMSAN1Q6PJG2 1045 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 C8orf86Q6ZUL3 223 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 NUDT8Q8WV74 236 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 ALKBH8Q96BT7 664 aaKnown RBP10.06□□□□□ -0.8
ATM-211ENST00000527389 DMRTB1Q96MA1 342 aa10.06□□□□□ -0.8
ATM-211ENST00000527389 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
ATM-211ENST00000527389 GPR182O15218 404 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 CES1P23141 567 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 SND1Q7KZF4 910 aaKnown RBP eCLIP10.05□□□□□ -0.8
ATM-211ENST00000527389 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 TRIM11Q96F44 468 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
ATM-211ENST00000527389 AFF1P51825 1210 aaKnown RBP10.04□□□□□ -0.8
ATM-211ENST00000527389 CEP120Q8N960 986 aa10.04□□□□□ -0.8
ATM-211ENST00000527389 SPACA7Q96KW9 195 aa10.04□□□□□ -0.8
ATM-211ENST00000527389 SMG9Q9H0W8 520 aaKnown RBP10.04□□□□□ -0.8
ATM-211ENST00000527389 ZFYVE28Q9HCC9 887 aa10.04□□□□□ -0.8
ATM-211ENST00000527389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
ATM-211ENST00000527389 NEFLP07196 543 aa10.03□□□□□ -0.8
ATM-211ENST00000527389 MAPK1P28482 360 aa10.03□□□□□ -0.8
ATM-211ENST00000527389 TMC7Q7Z402 723 aa10.03□□□□□ -0.8
ATM-211ENST00000527389 NOP53Q9NZM5 478 aaKnown RBP10.03□□□□□ -0.8
ATM-211ENST00000527389 EREGO14944 169 aa10.02□□□□□ -0.81
ATM-211ENST00000527389 IRS1P35568 1242 aa10.02□□□□□ -0.81
ATM-211ENST00000527389 ALYREFQ86V81 257 aaKnown RBP10.02□□□□□ -0.81
ATM-211ENST00000527389 NCAPG2Q86XI2 1143 aa10.02□□□□□ -0.81
ATM-211ENST00000527389 SUV39H2Q9H5I1 410 aa10.02□□□□□ -0.81
ATM-211ENST00000527389 AMOTL2Q9Y2J4 779 aa10.02□□□□□ -0.81
ATM-211ENST00000527389 PLVAPQ9BX97 442 aa10.01□□□□□ -0.81
ATM-211ENST00000527389 COL8A1P27658 744 aa10□□□□□ -0.81
ATM-211ENST00000527389 ATP11AP98196 1134 aa10□□□□□ -0.81
ATM-211ENST00000527389 DSC3Q14574 896 aa10□□□□□ -0.81
ATM-211ENST00000527389 CACTIN-AS1Q8N1I8 211 aa10□□□□□ -0.81
ATM-211ENST00000527389 TMC1Q8TDI8 760 aa10□□□□□ -0.81
ATM-211ENST00000527389 ASB16Q96NS5 453 aa10□□□□□ -0.81
ATM-211ENST00000527389 PBX4Q9BYU1 374 aa10□□□□□ -0.81
ATM-211ENST00000527389 DNAJC25Q9H1X3 360 aa10□□□□□ -0.81
ATM-211ENST00000527389 SPDYE3A6NKU9 549 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 TREHO43280 583 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 EDN3P14138 238 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 RASSF7Q02833 373 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 ORC1Q13415 861 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 MSL1Q68DK7 614 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 NIF3L1Q9GZT8 377 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 RASSF4Q9H2L5 321 aa9.99□□□□□ -0.81
ATM-211ENST00000527389 NFKBIEO00221 500 aa9.98□□□□□ -0.81
ATM-211ENST00000527389 GALNT12Q8IXK2 581 aa9.98□□□□□ -0.81
ATM-211ENST00000527389 DZANK1Q9NVP4 752 aa9.98□□□□□ -0.81
ATM-211ENST00000527389 CPNE3O75131 537 aaKnown RBP9.97□□□□□ -0.81
ATM-211ENST00000527389 SMNDC1O75940 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
ATM-211ENST00000527389 BAG6P46379 1132 aa9.97□□□□□ -0.81
ATM-211ENST00000527389 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
ATM-211ENST00000527389 TRIM33Q9UPN9 1127 aa9.97□□□□□ -0.81
ATM-211ENST00000527389 ACPPP15309 386 aa9.96□□□□□ -0.82
ATM-211ENST00000527389 PEAR1Q5VY43 1037 aaPredicted RBP9.96□□□□□ -0.82
ATM-211ENST00000527389 CEP135Q66GS9 1140 aa9.96□□□□□ -0.82
ATM-211ENST00000527389 WFDC8Q8IUA0 241 aa9.96□□□□□ -0.82
ATM-211ENST00000527389 EIF1AYO14602 144 aaKnown RBP9.95□□□□□ -0.82
ATM-211ENST00000527389 USPL1Q5W0Q7 1092 aa9.95□□□□□ -0.82
ATM-211ENST00000527389 DTWD1Q8N5C7 304 aa9.95□□□□□ -0.82
ATM-211ENST00000527389 TMEM102Q8N9M5 508 aaPredicted RBP9.95□□□□□ -0.82
ATM-211ENST00000527389 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
ATM-211ENST00000527389 CSRNP1Q96S65 589 aa9.95□□□□□ -0.82
ATM-211ENST00000527389 ZKSCAN3Q9BRR0 538 aa9.95□□□□□ -0.82
ATM-211ENST00000527389 POLR3DP05423 398 aaPredicted RBP9.94□□□□□ -0.82
ATM-211ENST00000527389 SPATA31C1P0DKV0 1188 aa9.94□□□□□ -0.82
ATM-211ENST00000527389 FMR1Q06787 632 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATM-211ENST00000527389 TRAPPC3LQ5T215 181 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms