RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DPYDQ12882 1025 aa6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 UVSSAQ2YD98 709 aa6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 DTX1Q86Y01 620 aa6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 GALNT11Q8NCW6 608 aa6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 NSUN5Q96P11 429 aaKnown RBP6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 RBSNQ9H1K0 784 aa6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 PPME1Q9Y570 386 aa6.21□□□□□ -1.42
CLNS1A-209ENST00000527299 PRR19A6NJB7 356 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 TM4SF5O14894 197 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 FOXO3O43524 673 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 WEE1P30291 646 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 GRIK1P39086 918 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 FAM46AQ96IP4 442 aaKnown RBP6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 CEP41Q9BYV8 373 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 LRFN2Q9ULH4 789 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 TRIM33Q9UPN9 1127 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 KCNMB2Q9Y691 235 aa6.2□□□□□ -1.42
CLNS1A-209ENST00000527299 WISP1O95388 367 aa6.19□□□□□ -1.42
CLNS1A-209ENST00000527299 KANK4Q5T7N3 995 aaPredicted RBP6.19□□□□□ -1.42
CLNS1A-209ENST00000527299 RNF43Q68DV7 783 aa6.19□□□□□ -1.42
CLNS1A-209ENST00000527299 RGL4Q8IZJ4 473 aa6.19□□□□□ -1.42
CLNS1A-209ENST00000527299 CMTR1Q8N1G2 835 aaKnown RBP6.19□□□□□ -1.42
CLNS1A-209ENST00000527299 FAM196BA6NMK8 535 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 LINC01387J3KSC0 135 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 SLC24A1O60721 1099 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 WNT11O96014 354 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 UBTFP17480 764 aaKnown RBP6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 CD68P34810 354 aaPredicted RBP6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 TREML1Q86YW5 311 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 ANKMY2Q8IV38 441 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 TRIM42Q8IWZ5 723 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 DBNDD2Q9BQY9 259 aa6.18□□□□□ -1.42
CLNS1A-209ENST00000527299 HMX2A2RU54 273 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L15C9J2P7 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L10C9JJH3 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L13C9JLJ4 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L11C9JVI0 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L21D6R901 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L18D6R9N7 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L22D6RA61 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L17D6RBQ6 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L19D6RCP7 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L20D6RJB6 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 USP17L24Q0WX57 530 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 ACAD11Q709F0 780 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 UTP4Q969X6 686 aaKnown RBP6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 MYRFLQ96LU7 910 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 KCNK4Q9NYG8 393 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 ADGRE2Q9UHX3 823 aa6.17□□□□□ -1.42
CLNS1A-209ENST00000527299 KIAA1211Q6ZU35 1233 aa6.16□□□□□ -1.42
CLNS1A-209ENST00000527299 NLRP13Q86W25 1043 aa6.16□□□□□ -1.42
CLNS1A-209ENST00000527299 VTI1AQ96AJ9 217 aa6.16□□□□□ -1.42
CLNS1A-209ENST00000527299 ARXQ96QS3 562 aa6.16□□□□□ -1.42
CLNS1A-209ENST00000527299 FLIIQ13045 1269 aa6.15□□□□□ -1.42
CLNS1A-209ENST00000527299 CLEC10AQ8IUN9 316 aa6.15□□□□□ -1.42
CLNS1A-209ENST00000527299 GLMNQ92990 594 aa6.15□□□□□ -1.42
CLNS1A-209ENST00000527299 FAM83CQ9BQN1 747 aa6.15□□□□□ -1.42
CLNS1A-209ENST00000527299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.15□□□□□ -1.424e-8■■■■□ 23.5
CLNS1A-209ENST00000527299 TPRNQ4KMQ1 711 aa6.14□□□□□ -1.43
CLNS1A-209ENST00000527299 COX20Q5RI15 118 aa6.14□□□□□ -1.43
CLNS1A-209ENST00000527299 COL13A1Q5TAT6 717 aaPredicted RBP6.14□□□□□ -1.43
CLNS1A-209ENST00000527299 FAM20CQ8IXL6 584 aa6.14□□□□□ -1.43
CLNS1A-209ENST00000527299 OR13H1Q8NG92 308 aa6.14□□□□□ -1.43
CLNS1A-209ENST00000527299 SHKBP1Q8TBC3 707 aa6.14□□□□□ -1.43
CLNS1A-209ENST00000527299 PRKCSHP14314 528 aaPredicted RBP6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 CDC27P30260 824 aa6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 ATP11AP98196 1134 aa6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 TRIP4Q15650 581 aaPredicted RBP6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 DUOXA2Q1HG44 320 aa6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 TXNDC11Q6PKC3 985 aa6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 KLHL23Q8NBE8 558 aa6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 LACRTQ9GZZ8 138 aa6.13□□□□□ -1.43
CLNS1A-209ENST00000527299 FSCN2O14926 492 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 CEP135Q66GS9 1140 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 ADAMTSL4Q6UY14 1074 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 ERICH6Q7L0X2 663 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 FOXD4L4Q8WXT5 416 aaPredicted RBP6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 CARD10Q9BWT7 1032 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 PPP1R12CQ9BZL4 782 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 VRTNQ9H8Y1 702 aa6.12□□□□□ -1.43
CLNS1A-209ENST00000527299 DDX3YO15523 660 aaKnown RBP6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 SMNDC1O75940 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 BMP3P12645 472 aa6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 JAG1P78504 1218 aa6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 HYAL2Q12891 473 aa6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 ETFBKMTQ8IXQ9 262 aa6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 FNBP4Q8N3X1 1017 aaPredicted RBP6.11□□□□□ -1.43
CLNS1A-209ENST00000527299 ADAM11O75078 769 aa6.1□□□□□ -1.43
CLNS1A-209ENST00000527299 HOXA10P31260 410 aaPredicted RBP6.1□□□□□ -1.43
CLNS1A-209ENST00000527299 ABI1Q8IZP0 508 aa6.1□□□□□ -1.43
CLNS1A-209ENST00000527299 KLHDC7BQ96G42 594 aa6.1□□□□□ -1.43
CLNS1A-209ENST00000527299 SPACA7Q96KW9 195 aa6.1□□□□□ -1.43
CLNS1A-209ENST00000527299 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
CLNS1A-209ENST00000527299 WDR64B1ANS9 1081 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 KIF4AO95239 1232 aa6.09□□□□□ -1.43
CLNS1A-209ENST00000527299 EPHA1P21709 976 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms