RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 QSER1Q2KHR3 1735 aa24.95■■□□□ 1.59
SMCO4-203ENST00000526869 RFX7Q2KHR2 1363 aa24.95■■□□□ 1.59
SMCO4-203ENST00000526869 REC8O95072 547 aa24.95■■□□□ 1.58
SMCO4-203ENST00000526869 ATP2B3Q16720 1220 aa24.95■■□□□ 1.58
SMCO4-203ENST00000526869 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
SMCO4-203ENST00000526869 CAMKK2Q96RR4 588 aa24.95■■□□□ 1.58
SMCO4-203ENST00000526869 ESYT1Q9BSJ8 1104 aa24.95■■□□□ 1.58
SMCO4-203ENST00000526869 SPEF2Q9C093 1822 aa24.95■■□□□ 1.58
SMCO4-203ENST00000526869 PDE8BO95263 885 aa24.94■■□□□ 1.58
SMCO4-203ENST00000526869 TIMM10P62072 90 aa24.94■■□□□ 1.58
SMCO4-203ENST00000526869 C3orf67Q6ZVT6 689 aa24.94■■□□□ 1.58
SMCO4-203ENST00000526869 CNBD1Q8NA66 436 aa24.94■■□□□ 1.58
SMCO4-203ENST00000526869 TNRC6CQ9HCJ0 1690 aaKnown RBP24.94■■□□□ 1.58
SMCO4-203ENST00000526869 HIP1O00291 1037 aa24.93■■□□□ 1.58
SMCO4-203ENST00000526869 EPB41L2O43491 1005 aaKnown RBP24.93■■□□□ 1.58
SMCO4-203ENST00000526869 IPO9Q96P70 1041 aaKnown RBP24.93■■□□□ 1.58
SMCO4-203ENST00000526869 HAUS7Q99871 368 aa24.93■■□□□ 1.58
SMCO4-203ENST00000526869 MAP4K4O95819 1239 aaPredicted RBP24.92■■□□□ 1.58
SMCO4-203ENST00000526869 PUM3Q15397 648 aaKnown RBP24.92■■□□□ 1.58
SMCO4-203ENST00000526869 ANKRD18AQ8IVF6 992 aa24.92■■□□□ 1.58
SMCO4-203ENST00000526869 NLGN1Q8N2Q7 840 aa24.92■■□□□ 1.58
SMCO4-203ENST00000526869 BOLA2Q9H3K6 86 aa24.92■■□□□ 1.58
SMCO4-203ENST00000526869 PRR5LQ6MZQ0 368 aa24.91■■□□□ 1.58
SMCO4-203ENST00000526869 COL23A1Q86Y22 540 aaPredicted RBP24.91■■□□□ 1.58
SMCO4-203ENST00000526869 XAGE2Q96GT9 111 aa24.91■■□□□ 1.58
SMCO4-203ENST00000526869 A0A1B0GUL6 1792 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 NRXN2Q9P2S2 1712 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 NPHP1O15259 732 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 SERPINB2P05120 415 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 FGFR2P21802 821 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 CCDC158Q5M9N0 1113 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 LPIN2Q92539 896 aa24.9■■□□□ 1.58
SMCO4-203ENST00000526869 ZNF512BQ96KM6 892 aaPredicted RBP24.9■■□□□ 1.58
SMCO4-203ENST00000526869 BSDC1Q9NW68 430 aaPredicted RBP24.9■■□□□ 1.58
SMCO4-203ENST00000526869 ST5P78524 1137 aa24.89■■□□□ 1.58
SMCO4-203ENST00000526869 GORABQ5T7V8 394 aa24.89■■□□□ 1.58
SMCO4-203ENST00000526869 RUFY2Q8WXA3 655 aa24.89■■□□□ 1.58
SMCO4-203ENST00000526869 PNPLA7Q6ZV29 1317 aa24.88■■□□□ 1.57
SMCO4-203ENST00000526869 COL4A1P02462 1669 aa24.88■■□□□ 1.57
SMCO4-203ENST00000526869 POLRMTO00411 1230 aaKnown RBP24.88■■□□□ 1.57
SMCO4-203ENST00000526869 BAG6P46379 1132 aa24.88■■□□□ 1.57
SMCO4-203ENST00000526869 DDR1Q08345 913 aa24.88■■□□□ 1.57
SMCO4-203ENST00000526869 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
SMCO4-203ENST00000526869 USP26Q9BXU7 913 aa24.88■■□□□ 1.57
SMCO4-203ENST00000526869 DIAPH3Q9NSV4 1193 aa24.88■■□□□ 1.57
SMCO4-203ENST00000526869 SGSM2O43147 1006 aa24.87■■□□□ 1.57
SMCO4-203ENST00000526869 SLC5A1P13866 664 aa24.87■■□□□ 1.57
SMCO4-203ENST00000526869 ADORA1P30542 326 aa24.87■■□□□ 1.57
SMCO4-203ENST00000526869 EN1Q05925 392 aaPredicted RBP24.87■■□□□ 1.57
SMCO4-203ENST00000526869 EZH2Q15910 746 aaKnown RBP24.87■■□□□ 1.57
SMCO4-203ENST00000526869 RAD50Q92878 1312 aa24.86■■□□□ 1.57
SMCO4-203ENST00000526869 IFIT1P09914 478 aaKnown RBP24.86■■□□□ 1.57
SMCO4-203ENST00000526869 TTC39AQ5SRH9 613 aa24.86■■□□□ 1.57
SMCO4-203ENST00000526869 DDX46Q7L014 1031 aaKnown RBP24.86■■□□□ 1.57
SMCO4-203ENST00000526869 FSD1Q9BTV5 496 aa24.86■■□□□ 1.57
SMCO4-203ENST00000526869 STK32BQ9NY57 414 aa24.86■■□□□ 1.57
SMCO4-203ENST00000526869 RPS8P62241 208 aaKnown RBP24.85■■□□□ 1.57
SMCO4-203ENST00000526869 CHRNDQ07001 517 aa24.85■■□□□ 1.57
SMCO4-203ENST00000526869 SLC15A2Q16348 729 aa24.85■■□□□ 1.57
SMCO4-203ENST00000526869 CRY2Q49AN0 593 aa24.84■■□□□ 1.57
SMCO4-203ENST00000526869 KBTBD3Q8NAB2 608 aa24.84■■□□□ 1.57
SMCO4-203ENST00000526869 CELF1Q92879 486 aaKnown RBP24.84■■□□□ 1.57
SMCO4-203ENST00000526869 SNRKQ9NRH2 765 aa24.84■■□□□ 1.57
SMCO4-203ENST00000526869 PAG1Q9NWQ8 432 aa24.84■■□□□ 1.57
SMCO4-203ENST00000526869 UQCRFS1P1P0C7P4 283 aa24.83■■□□□ 1.57
SMCO4-203ENST00000526869 DNAJC2Q99543 621 aaKnown RBP24.83■■□□□ 1.57
SMCO4-203ENST00000526869 KLRG2A4D1S0 409 aaPredicted RBP24.82■■□□□ 1.56
SMCO4-203ENST00000526869 MSH5O43196 834 aa24.82■■□□□ 1.56
SMCO4-203ENST00000526869 ARID4AP29374 1257 aaPredicted RBP24.82■■□□□ 1.56
SMCO4-203ENST00000526869 CCDC24Q8N4L8 307 aa24.82■■□□□ 1.56
SMCO4-203ENST00000526869 HELBQ8NG08 1087 aaPredicted RBP24.82■■□□□ 1.56
SMCO4-203ENST00000526869 ANO8Q9HCE9 1232 aaPredicted RBP24.82■■□□□ 1.56
SMCO4-203ENST00000526869 MINPP1Q9UNW1 487 aa24.82■■□□□ 1.56
SMCO4-203ENST00000526869 GRAPQ13588 217 aa24.81■■□□□ 1.56
SMCO4-203ENST00000526869 UBE4AQ14139 1066 aa24.81■■□□□ 1.56
SMCO4-203ENST00000526869 CCDC125Q86Z20 511 aa24.81■■□□□ 1.56
SMCO4-203ENST00000526869 GRAPLQ8TC17 118 aaPredicted RBP24.81■■□□□ 1.56
SMCO4-203ENST00000526869 ANKRD2Q9GZV1 360 aa24.81■■□□□ 1.56
SMCO4-203ENST00000526869 TAF1P21675 1872 aa24.81■■□□□ 1.56
SMCO4-203ENST00000526869 LRRFIP1Q32MZ4 808 aaKnown RBP24.8■■□□□ 1.56
SMCO4-203ENST00000526869 MCCP23508 829 aa24.79■■□□□ 1.56
SMCO4-203ENST00000526869 HOXA10P31260 410 aaPredicted RBP24.79■■□□□ 1.56
SMCO4-203ENST00000526869 CCDC102BQ68D86 513 aa24.79■■□□□ 1.56
SMCO4-203ENST00000526869 CWC27Q6UX04 472 aaKnown RBP24.79■■□□□ 1.56
SMCO4-203ENST00000526869 RPGRQ92834 1020 aaKnown RBP24.79■■□□□ 1.56
SMCO4-203ENST00000526869 EDC3Q96F86 508 aaKnown RBP24.79■■□□□ 1.56
SMCO4-203ENST00000526869 ANO2Q9NQ90 1003 aa24.79■■□□□ 1.56
SMCO4-203ENST00000526869 AKAP11Q9UKA4 1901 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 GOLIM4O00461 696 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 TAF5LO75529 589 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 NMIQ13287 307 aaPredicted RBP24.78■■□□□ 1.56
SMCO4-203ENST00000526869 BECN1Q14457 450 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 KIAA1211Q6ZU35 1233 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 KIF2CQ99661 725 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 BRIP1Q9BX63 1249 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 MED23Q9ULK4 1368 aa24.78■■□□□ 1.56
SMCO4-203ENST00000526869 ANKRD31Q8N7Z5 1873 aa24.77■■□□□ 1.56
SMCO4-203ENST00000526869 IL17RAQ96F46 866 aa24.77■■□□□ 1.56
SMCO4-203ENST00000526869 RBM17Q96I25 401 aaKnown RBP24.77■■□□□ 1.56
SMCO4-203ENST00000526869 IL25Q9H293 177 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms