RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PDIA4P13667 645 aaKnown RBP7.36□□□□□ -1.23
USP48-211ENST00000526044 MZF1P28698 734 aaPredicted RBP7.36□□□□□ -1.23
USP48-211ENST00000526044 DNM1Q05193 864 aaKnown RBP7.36□□□□□ -1.23
USP48-211ENST00000526044 GLYCTKQ8IVS8 523 aa7.36□□□□□ -1.23
USP48-211ENST00000526044 EDEM1Q92611 657 aa7.36□□□□□ -1.23
USP48-211ENST00000526044 NUDT16Q96DE0 195 aaKnown RBP7.36□□□□□ -1.23
USP48-211ENST00000526044 MDFIQ99750 246 aa7.36□□□□□ -1.23
USP48-211ENST00000526044 UBE2OQ9C0C9 1292 aaKnown RBP7.36□□□□□ -1.23
USP48-211ENST00000526044 IGFLR1Q9H665 355 aa7.36□□□□□ -1.23
USP48-211ENST00000526044 ZFATQ9P243 1243 aa7.36□□□□□ -1.23
USP48-211ENST00000526044 GNEQ9Y223 722 aaKnown RBP7.36□□□□□ -1.23
USP48-211ENST00000526044 H3BRB1 525 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 ITGB7P26010 798 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 ADH7P40394 386 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 KCNA1Q09470 495 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 TRIP4Q15650 581 aaPredicted RBP7.35□□□□□ -1.23
USP48-211ENST00000526044 PCSK7Q16549 785 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 NLRP13Q86W25 1043 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 TTC16Q8NEE8 873 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 PLVAPQ9BX97 442 aa7.35□□□□□ -1.23
USP48-211ENST00000526044 TUT1Q9H6E5 874 aaKnown RBP7.35□□□□□ -1.23
USP48-211ENST00000526044 APBA3O96018 575 aa7.34□□□□□ -1.23
USP48-211ENST00000526044 PDGFAP04085 211 aa7.34□□□□□ -1.23
USP48-211ENST00000526044 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
USP48-211ENST00000526044 DHX32Q7L7V1 743 aaKnown RBP7.34□□□□□ -1.23
USP48-211ENST00000526044 NBPF11Q86T75 865 aa7.34□□□□□ -1.23
USP48-211ENST00000526044 DNAJB12Q9NXW2 375 aaKnown RBP7.34□□□□□ -1.23
USP48-211ENST00000526044 ABCC8Q09428 1581 aa7.33□□□□□ -1.24
USP48-211ENST00000526044 PATL2C9JE40 543 aaKnown RBP7.33□□□□□ -1.24
USP48-211ENST00000526044 USP5P45974 858 aa7.33□□□□□ -1.24
USP48-211ENST00000526044 ZFP64Q9NPA5 681 aa7.33□□□□□ -1.24
USP48-211ENST00000526044 TLR7Q9NYK1 1049 aaKnown RBP7.33□□□□□ -1.24
USP48-211ENST00000526044 POLIQ9UNA4 740 aa7.33□□□□□ -1.24
USP48-211ENST00000526044 FZD6O60353 706 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 MMP20O60882 483 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 PSAPP07602 524 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 ECM1Q16610 540 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
USP48-211ENST00000526044 C8orf34Q49A92 452 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 PDE12Q6L8Q7 609 aaKnown RBP7.32□□□□□ -1.24
USP48-211ENST00000526044 TRPM4Q8TD43 1214 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 SLC6A14Q9UN76 642 aa7.32□□□□□ -1.24
USP48-211ENST00000526044 WRNQ14191 1432 aaPredicted RBP eCLIP7.32□□□□□ -1.24
USP48-211ENST00000526044 MRC2Q9UBG0 1479 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 SOWAHDA6NJG2 315 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 NRLP54845 237 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 PLAURQ03405 335 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 TTC39BQ5VTQ0 682 aaPredicted RBP7.31□□□□□ -1.24
USP48-211ENST00000526044 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 ZNF438Q7Z4V0 828 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 TRIM11Q96F44 468 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 GGNBP2Q9H3C7 697 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 ELP3Q9H9T3 547 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 CCDC87Q9NVE4 849 aa7.31□□□□□ -1.24
USP48-211ENST00000526044 ZBTB42B2RXF5 422 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 SOX18P35713 384 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 GPLD1P80108 840 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 ARHGAP4P98171 946 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 EHHADHQ08426 723 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 KRTAP1-3Q8IUG1 177 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 NACC1Q96RE7 527 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 ABI2Q9NYB9 513 aaPredicted RBP7.3□□□□□ -1.24
USP48-211ENST00000526044 BRPF3Q9ULD4 1205 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 STARD13Q9Y3M8 1113 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 IVNS1ABPQ9Y6Y0 642 aa7.3□□□□□ -1.24
USP48-211ENST00000526044 URB2Q14146 1524 aaKnown RBP7.3□□□□□ -1.24
USP48-211ENST00000526044 CUX1P39880 1505 aa7.29□□□□□ -1.24
USP48-211ENST00000526044 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
USP48-211ENST00000526044 ARTNQ5T4W7 220 aa7.29□□□□□ -1.24
USP48-211ENST00000526044 FAM35AQ86V20 835 aa7.29□□□□□ -1.24
USP48-211ENST00000526044 OR13H1Q8NG92 308 aa7.29□□□□□ -1.24
USP48-211ENST00000526044 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
USP48-211ENST00000526044 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 M0R082 166 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 NDUFB5O43674 189 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 HOXD8P13378 290 aaPredicted RBP7.28□□□□□ -1.24
USP48-211ENST00000526044 SIK1P57059 783 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 MLLT1Q03111 559 aaPredicted RBP7.28□□□□□ -1.24
USP48-211ENST00000526044 NKAPLQ5M9Q1 402 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 AEBP1Q8IUX7 1158 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 GJD3Q8N144 294 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 MICALL1Q8N3F8 863 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
USP48-211ENST00000526044 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 TMEM63CQ9P1W3 806 aa7.28□□□□□ -1.24
USP48-211ENST00000526044 TOP2BQ02880 1626 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 A6NHS1 94 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 DYRK3O43781 588 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 ALBP02768 609 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 CPB1P15086 417 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 PSAPL1Q6NUJ1 521 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 C20orf204Q6ZNR8 217 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 CITED4Q96RK1 184 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 PRDM6Q9NQX0 595 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 BIN2Q9UBW5 565 aaPredicted RBP7.27□□□□□ -1.25
USP48-211ENST00000526044 SYNJ1O43426 1573 aa7.27□□□□□ -1.25
USP48-211ENST00000526044 THOC2Q8NI27 1593 aaKnown RBP7.27□□□□□ -1.25
USP48-211ENST00000526044 BIVM-ERCC5R4GMW8 1640 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms