RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CASQ1P31415 396 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 IMMTQ16891 758 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF827Q17R98 1081 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 LRRFIP1Q32MZ4 808 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 ANKRD13DQ6ZTN6 518 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 MRPS27Q92552 414 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 RUFY1Q96T51 708 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 SLC26A6Q9BXS9 759 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 XPO4Q9C0E2 1151 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 ANKRD65E5RJM6 399 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 SEC31AO94979 1220 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 SYKP43405 635 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 KSR2Q6VAB6 950 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 VPS37DQ86XT2 251 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 PHKBQ93100 1093 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 DESI2Q9BSY9 194 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 OGFRQ9NZT2 677 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 MAPK8IP1Q9UQF2 711 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 KDM5AP29375 1690 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF213O14771 459 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 METTL24Q5JXM2 366 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 AK7Q96M32 723 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 TSPYL1Q9H0U9 437 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 CLSTN2Q9H4D0 955 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 TTC37Q6PGP7 1564 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 TATP17735 454 aaPredicted RBP8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 HOXC9P31274 260 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 MCMDC2Q4G0Z9 681 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 DDX17Q92841 729 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 DRC1Q96MC2 740 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 CWC15Q9P013 229 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 PHF8Q9UPP1 1060 aa8.04□□□□□ -1.12
TGFBR3-207ENST00000525962 TDO2P48775 406 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 DNAJC21Q5F1R6 531 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 SSH3Q8TE77 659 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 IBTKQ9P2D0 1353 aaPredicted RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 SPTLC2O15270 562 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 ADKP55263 362 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 DMTNQ08495 405 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 BMS1Q14692 1282 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 FILIP1LQ4L180 1135 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 CCDC70Q6NSX1 233 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF397Q8NF99 534 aaPredicted RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 ANKRD24Q8TF21 1146 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 TIGD1Q96MW7 591 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 GTPBP4Q9BZE4 634 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 PLEKHA4Q9H4M7 779 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 JMYQ8N9B5 988 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 PLIN2Q99541 437 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 ALG1Q9BT22 464 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 ZCCHC17Q9NP64 241 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 GLI2P10070 1586 aa8.03□□□□□ -1.12
TGFBR3-207ENST00000525962 PRR36Q9H6K5 1346 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 IFIT3O14879 490 aaKnown RBP8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 PRC1O43663 620 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 TERF1P54274 439 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 EVCP57679 992 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 NCBP1Q09161 790 aaKnown RBP8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 TAF3Q5VWG9 929 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 TOM1L2Q6ZVM7 507 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 PI4K2BQ8TCG2 481 aa8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 IPO4Q8TEX9 1081 aaKnown RBP8.02□□□□□ -1.12
TGFBR3-207ENST00000525962 POGZQ7Z3K3 1410 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 SF3A3Q12874 501 aaKnown RBP eCLIP8.02□□□□□ -1.134e-7■■■■■ 31.4
TGFBR3-207ENST00000525962 NOM1Q5C9Z4 860 aaKnown RBP8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 LRRC8AQ8IWT6 810 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 EPB41L2O43491 1005 aaKnown RBP8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 DPCR1Q3MIW9 517 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 PROSER2Q86WR7 435 aaPredicted RBP8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 AIDAQ96BJ3 306 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 AIFM3Q96NN9 605 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 CLIC6Q96NY7 704 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
TGFBR3-207ENST00000525962 GOLGA8AA7E2F4 631 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 JAKMIP3Q5VZ66 844 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 LINS1Q8NG48 757 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 PGBD1Q96JS3 809 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 CAPZA3Q96KX2 299 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 ZSCAN16Q9H4T2 348 aaPredicted RBP8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 ZSWIM6Q9HCJ5 1215 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 PAG1Q9NWQ8 432 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 CALCOCO1Q9P1Z2 691 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 RSPH14Q9UHP6 348 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 RGS12O14924 1447 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 ATP1A3P13637 1013 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 KCNA6P17658 529 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 METAP2P50579 478 aaKnown RBP eCLIP8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 NDUFA8P51970 172 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 EIF4A1P60842 406 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 SETQ01105 290 aaPredicted RBP8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 SCRN1Q12765 414 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 PNOCQ13519 176 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 BEND3Q5T5X7 828 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 BICDL1Q6ZP65 573 aa8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 DHX32Q7L7V1 743 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-207ENST00000525962 FAM107BQ9H098 131 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms