RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 CDK12Q9NYV4 1490 aaPredicted RBP8.26□□□□□ -1.09
ATM-206ENST00000525056 AXIN1O15169 862 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 TRIM27P14373 513 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 DDIT3P35638 169 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 WDR4P57081 412 aaKnown RBP8.25□□□□□ -1.09
ATM-206ENST00000525056 RAB15P59190 212 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 NUCB2P80303 420 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 XPCQ01831 940 aaPredicted RBP8.25□□□□□ -1.09
ATM-206ENST00000525056 CCDC173Q0VFZ6 552 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 CASC1Q6TDU7 716 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 LRRC59Q96AG4 307 aaKnown RBP8.25□□□□□ -1.09
ATM-206ENST00000525056 C8orf37Q96NL8 207 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 PLEKHF1Q96S99 279 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 API5Q9BZZ5 524 aaKnown RBP8.25□□□□□ -1.09
ATM-206ENST00000525056 GRPEL1Q9HAV7 217 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 CWC22Q9HCG8 908 aaKnown RBP8.25□□□□□ -1.09
ATM-206ENST00000525056 MARF1Q9Y4F3 1742 aaKnown RBP8.25□□□□□ -1.09
ATM-206ENST00000525056 AFF2P51816 1311 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 C1orf167Q5SNV9 1468 aa8.25□□□□□ -1.09
ATM-206ENST00000525056 CPSF1Q10570 1443 aaKnown RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 CAPN5O15484 640 aaPredicted RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 DIAPH1O60610 1272 aaKnown RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 TIMP2P16035 220 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 SOX11P35716 441 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 GNAI1P63096 354 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 RAB3GAP1Q15042 981 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 PPP1R26Q5T8A7 1209 aaPredicted RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 ZNF772Q68DY9 489 aaPredicted RBP8.24□□□□□ -1.09
ATM-206ENST00000525056 CHD1LQ86WJ1 897 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 ITPRIPQ8IWB1 547 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 SEPT12Q8IYM1 358 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
ATM-206ENST00000525056 A0A1W2PP64 1363 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 AATKQ6ZMQ8 1374 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 KNDC1Q76NI1 1749 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 POM121CA8CG34 1229 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 ERVH48-1M5A8F1 160 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
ATM-206ENST00000525056 ZIC2O95409 532 aaPredicted RBP8.23□□□□□ -1.09
ATM-206ENST00000525056 HSP90AA1P07900 732 aaKnown RBP8.23□□□□□ -1.09
ATM-206ENST00000525056 RLBP1P12271 317 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 XRCC6P12956 609 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATM-206ENST00000525056 RXRBP28702 533 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 MCM2P49736 904 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 SAFB2Q14151 953 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATM-206ENST00000525056 RABEP1Q15276 862 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 MTERF4Q7Z6M4 381 aaKnown RBP8.23□□□□□ -1.09
ATM-206ENST00000525056 SKAP1Q86WV1 359 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 ITPKCQ96DU7 683 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 MAP7D2Q96T17 732 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 SLC12A5Q9H2X9 1139 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 ZFAND3Q9H8U3 227 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 IFT57Q9NWB7 429 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 TRAK1Q9UPV9 953 aa8.23□□□□□ -1.09
ATM-206ENST00000525056 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
ATM-206ENST00000525056 CDC45O75419 566 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 MCM5P33992 734 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 MFAP1P55081 439 aaKnown RBP8.22□□□□□ -1.09
ATM-206ENST00000525056 EXOSC9Q06265 439 aaKnown RBP8.22□□□□□ -1.09
ATM-206ENST00000525056 KLHL40Q2TBA0 621 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 NGLY1Q96IV0 654 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 ALG2Q9H553 416 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 FMN2Q9NZ56 1722 aa8.22□□□□□ -1.09
ATM-206ENST00000525056 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.09
ATM-206ENST00000525056 YTHDC2Q9H6S0 1430 aaKnown RBP8.21□□□□□ -1.09
ATM-206ENST00000525056 FOXO3O43524 673 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 SSH1Q8WYL5 1049 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 ZMYND15Q9H091 742 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 QTRT2Q9H974 415 aaKnown RBP8.21□□□□□ -1.1
ATM-206ENST00000525056 TMPRSS4Q9NRS4 437 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 DACH1Q9UI36 760 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 ABCC4O15439 1325 aa8.21□□□□□ -1.1
ATM-206ENST00000525056 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.1
ATM-206ENST00000525056 BRWD3Q6RI45 1802 aa8.2□□□□□ -1.1
ATM-206ENST00000525056 NRKQ7Z2Y5 1582 aa8.2□□□□□ -1.1
ATM-206ENST00000525056 INTS3Q68E01 1043 aaKnown RBP8.2□□□□□ -1.1
ATM-206ENST00000525056 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.2□□□□□ -1.1
ATM-206ENST00000525056 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
ATM-206ENST00000525056 SOS1Q07889 1333 aaPredicted RBP8.2□□□□□ -1.1
ATM-206ENST00000525056 SOS2Q07890 1332 aaPredicted RBP8.2□□□□□ -1.1
ATM-206ENST00000525056 CD163L1Q9NR16 1453 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 REC8O95072 547 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 RIPK4P57078 832 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 ZNF445P59923 1031 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 NFE2L2Q16236 605 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 SLFNL1Q499Z3 407 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 PHTF2Q8N3S3 785 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 TMEM57Q8N5G2 664 aa8.19□□□□□ -1.1
ATM-206ENST00000525056 NOB1Q9ULX3 412 aaKnown RBP8.19□□□□□ -1.1
ATM-206ENST00000525056 RRP7AQ9Y3A4 280 aaKnown RBP8.19□□□□□ -1.1
ATM-206ENST00000525056 U2SURPO15042 1029 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms