RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 TFCP2Q12800 502 aa9.82□□□□□ -0.84
CHD7-202ENST00000524602 KLHDC4Q8TBB5 520 aa9.82□□□□□ -0.84
CHD7-202ENST00000524602 NUP188Q5SRE5 1749 aa9.82□□□□□ -0.84
CHD7-202ENST00000524602 LEO1Q8WVC0 666 aaPredicted RBP9.82□□□□□ -0.84
CHD7-202ENST00000524602 KIF3AQ9Y496 699 aa9.82□□□□□ -0.84
CHD7-202ENST00000524602 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
CHD7-202ENST00000524602 LAMA4Q16363 1823 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHD7-202ENST00000524602 CASP7P55210 303 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 TNMDQ9H2S6 317 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 CLSTN2Q9H4D0 955 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 HELLSQ9NRZ9 838 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 CFAP45Q9UL16 551 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 ABCA3Q99758 1704 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 TYRO3Q06418 890 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 ATL3Q6DD88 541 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 UBE3BQ7Z3V4 1068 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 KBTBD3Q8NAB2 608 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 DDX54Q8TDD1 881 aaKnown RBP9.81□□□□□ -0.84
CHD7-202ENST00000524602 UBR2Q8IWV8 1755 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 DNTTIP2Q5QJE6 756 aaKnown RBP9.81□□□□□ -0.84
CHD7-202ENST00000524602 DSCC1Q9BVC3 393 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 MRVI1Q9Y6F6 885 aa9.81□□□□□ -0.84
CHD7-202ENST00000524602 A0A087WZG4 1122 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.8□□□□□ -0.84
CHD7-202ENST00000524602 FERMT3Q86UX7 667 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 SMARCC2Q8TAQ2 1214 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 USP16Q9Y5T5 823 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 LIG1P18858 919 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 RESTQ13127 1097 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 NAA16Q6N069 864 aaPredicted RBP9.8□□□□□ -0.84
CHD7-202ENST00000524602 Q6ZUG5 572 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 TTC12Q9H892 705 aaPredicted RBP9.8□□□□□ -0.84
CHD7-202ENST00000524602 DACT1Q9NYF0 836 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 TAF6LQ9Y6J9 622 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 TJP1Q07157 1748 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 PFKFB2O60825 505 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 KIAA1524Q8TCG1 905 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
CHD7-202ENST00000524602 H3BQV1 296 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 H7C1W4 665 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 CYP21A2P08686 494 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 TCEANC2Q96MN5 208 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 DBNDD2Q9BQY9 259 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 PAPPAQ13219 1627 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 CTAGE5O15320 804 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 CYP27B1O15528 508 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 CABP4P57796 275 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.79□□□□□ -0.84
CHD7-202ENST00000524602 EDC3Q96F86 508 aaKnown RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 DNAJC2Q99543 621 aaKnown RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 NHSL1Q5SYE7 1610 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 AP5Z1O43299 807 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 HSP90B1P14625 803 aaKnown RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 IL15P40933 162 aaPredicted RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 STK3Q13188 491 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 TDRD7Q8NHU6 1098 aaKnown RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 BRF1Q92994 677 aa9.79□□□□□ -0.84
CHD7-202ENST00000524602 ZNF830Q96NB3 372 aaPredicted RBP9.79□□□□□ -0.84
CHD7-202ENST00000524602 FOXO4P98177 505 aa9.78□□□□□ -0.84
CHD7-202ENST00000524602 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
CHD7-202ENST00000524602 FBXL16Q8N461 479 aa9.78□□□□□ -0.84
CHD7-202ENST00000524602 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
CHD7-202ENST00000524602 CIAO1O76071 339 aa9.78□□□□□ -0.84
CHD7-202ENST00000524602 LRRFIP1Q32MZ4 808 aaKnown RBP9.78□□□□□ -0.84
CHD7-202ENST00000524602 LMBR1LQ6UX01 489 aa9.78□□□□□ -0.84
CHD7-202ENST00000524602 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
CHD7-202ENST00000524602 CHAF1AQ13111 956 aaPredicted RBP9.77□□□□□ -0.84
CHD7-202ENST00000524602 ANO6Q4KMQ2 910 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 ZMYM1Q5SVZ6 1142 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 BICD2Q8TD16 824 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 CBX8Q9HC52 389 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 CWC25Q9NXE8 425 aaPredicted RBP9.77□□□□□ -0.84
CHD7-202ENST00000524602 PRDM4Q9UKN5 801 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 WDR17Q8IZU2 1322 aa9.77□□□□□ -0.84
CHD7-202ENST00000524602 JAK2O60674 1132 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 CDC25BP30305 580 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 EXOSC10Q01780 885 aaKnown RBP9.77□□□□□ -0.85
CHD7-202ENST00000524602 SCRN1Q12765 414 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 CAMK4Q16566 473 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 ATG9AQ7Z3C6 839 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 BBXQ8WY36 941 aaPredicted RBP9.77□□□□□ -0.85
CHD7-202ENST00000524602 PGBD1Q96JS3 809 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 KCNF1Q9H3M0 494 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 TFIP11Q9UBB9 837 aaKnown RBP9.77□□□□□ -0.85
CHD7-202ENST00000524602 TOM1L2Q6ZVM7 507 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 DDX46Q7L014 1031 aaKnown RBP9.77□□□□□ -0.85
CHD7-202ENST00000524602 PLA2G4DQ86XP0 818 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 CCDC191Q8NCU4 936 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 ZNF274Q96GC6 653 aaPredicted RBP9.77□□□□□ -0.85
CHD7-202ENST00000524602 FBXO3Q9UK99 471 aa9.77□□□□□ -0.85
CHD7-202ENST00000524602 ATP5J2-PTCD1G3V325 749 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 PTCD1O75127 700 aaKnown RBP9.76□□□□□ -0.85
CHD7-202ENST00000524602 NR1I2O75469 434 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms