RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.49
VPS13B-212ENST00000524330 RIPOR2Q9Y4F9 1068 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 C4BP0C0L5 1744 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 PDE8BO95263 885 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 HCLS1P14317 486 aaPredicted RBP12.01□□□□□ -0.49
VPS13B-212ENST00000524330 SSFA2P28290 1259 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 TIMM10P62072 90 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 SF3B3Q15393 1217 aaKnown RBP12.01□□□□□ -0.49
VPS13B-212ENST00000524330 KBTBD3Q8NAB2 608 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 FLAD1Q8NFF5 587 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 XAGE2Q96GT9 111 aa12.01□□□□□ -0.49
VPS13B-212ENST00000524330 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
VPS13B-212ENST00000524330 PUS3Q9BZE2 481 aaKnown RBP12.01□□□□□ -0.49
VPS13B-212ENST00000524330 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 TRIM37O94972 964 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 HSPA4P34932 840 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 SLC4A3P48751 1232 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
VPS13B-212ENST00000524330 HELLSQ9NRZ9 838 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
VPS13B-212ENST00000524330 HMG20BQ9P0W2 317 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
VPS13B-212ENST00000524330 CARMIL3Q8ND23 1372 aa12□□□□□ -0.49
VPS13B-212ENST00000524330 PSMA5P28066 241 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
VPS13B-212ENST00000524330 KRT32Q14532 448 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 MCMDC2Q4G0Z9 681 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 IL17RAQ96F46 866 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 SNRKQ9NRH2 765 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 CHMP5Q9NZZ3 219 aa11.99□□□□□ -0.49
VPS13B-212ENST00000524330 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 GOLIM4O00461 696 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 PLSCR1O15162 318 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 KCNQ4P56696 695 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 ST5P78524 1137 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
VPS13B-212ENST00000524330 PTF1AQ7RTS3 328 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 KIF2CQ99661 725 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
VPS13B-212ENST00000524330 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
VPS13B-212ENST00000524330 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
VPS13B-212ENST00000524330 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
VPS13B-212ENST00000524330 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
VPS13B-212ENST00000524330 PHF14O94880 888 aa11.97□□□□□ -0.49
VPS13B-212ENST00000524330 NEK4P51957 841 aa11.97□□□□□ -0.49
VPS13B-212ENST00000524330 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS13B-212ENST00000524330 TXNRD1Q16881 649 aa11.97□□□□□ -0.49
VPS13B-212ENST00000524330 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
VPS13B-212ENST00000524330 BSDC1Q9NW68 430 aaPredicted RBP11.97□□□□□ -0.49
VPS13B-212ENST00000524330 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
VPS13B-212ENST00000524330 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
VPS13B-212ENST00000524330 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
VPS13B-212ENST00000524330 LRP5O75197 1615 aa11.97□□□□□ -0.49
VPS13B-212ENST00000524330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
VPS13B-212ENST00000524330 APBA3O96018 575 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 UBE4AQ14139 1066 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 CAVIN4Q5BKX8 364 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 CNBD1Q8NA66 436 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 SLKQ9H2G2 1235 aaPredicted RBP11.96□□□□□ -0.49
VPS13B-212ENST00000524330 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 CTNNA3Q9UI47 895 aa11.96□□□□□ -0.49
VPS13B-212ENST00000524330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.96□□□□□ -0.49
VPS13B-212ENST00000524330 COL24A1Q17RW2 1714 aa11.95□□□□□ -0.5
VPS13B-212ENST00000524330 ARID4AP29374 1257 aaPredicted RBP11.95□□□□□ -0.5
VPS13B-212ENST00000524330 VGLL2Q8N8G2 317 aa11.95□□□□□ -0.5
VPS13B-212ENST00000524330 MAP4K1Q92918 833 aa11.95□□□□□ -0.5
VPS13B-212ENST00000524330 RBM8AQ9Y5S9 174 aaKnown RBP11.95□□□□□ -0.5
VPS13B-212ENST00000524330 CYP46A1Q9Y6A2 500 aa11.95□□□□□ -0.5
VPS13B-212ENST00000524330 MED23Q9ULK4 1368 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 IGSF3O75054 1194 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 PTMSP20962 102 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 FGFR2P21802 821 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 ADORA1P30542 326 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 RPS8P62241 208 aaKnown RBP11.94□□□□□ -0.5
VPS13B-212ENST00000524330 CHRNDQ07001 517 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 MAP3K12Q12852 859 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 ANKRD1Q15327 319 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 VPS37DQ86XT2 251 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 NLGN1Q8N2Q7 840 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 DSCC1Q9BVC3 393 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 SEC31BQ9NQW1 1179 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 TFCP2L1Q9NZI6 479 aa11.94□□□□□ -0.5
VPS13B-212ENST00000524330 A0A0D9SFI3 127 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 SEMA3EO15041 775 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 HMGB1P09429 215 aaKnown RBP11.93□□□□□ -0.5
VPS13B-212ENST00000524330 NUCB2P80303 420 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 NFIXQ14938 502 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 WASHC4Q2M389 1173 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 CCDC102BQ68D86 513 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 PRPF40BQ6NWY9 871 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms