RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 SPEF2Q9C093 1822 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 PPIP5K2O43314 1243 aa20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 GPSM2P81274 684 aa20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 ITPRIPQ8IWB1 547 aa20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 ZNF784Q8NCA9 323 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC9-214ENST00000523777 GNAI2P04899 355 aa20.21■□□□□ 0.83
TRAPPC9-214ENST00000523777 KIAA2012Q0VF49 1180 aa20.21■□□□□ 0.83
TRAPPC9-214ENST00000523777 WASHC4Q2M389 1173 aa20.21■□□□□ 0.83
TRAPPC9-214ENST00000523777 NIM1KQ8IY84 436 aa20.21■□□□□ 0.83
TRAPPC9-214ENST00000523777 CNNM1Q9NRU3 951 aa20.21■□□□□ 0.83
TRAPPC9-214ENST00000523777 LEMD3Q9Y2U8 911 aa20.21■□□□□ 0.83
TRAPPC9-214ENST00000523777 COL4A1P02462 1669 aa20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 LTBP1Q14766 1721 aa20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 GLTPD2A6NH11 291 aa20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 PDE3AQ14432 1141 aa20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 TBC1D16Q8TBP0 767 aa20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 ZC3H12CQ9C0D7 883 aaKnown RBP20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 GPBP1L1Q9HC44 474 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 TNNQ9UQP3 1299 aa20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
TRAPPC9-214ENST00000523777 FZD9O00144 591 aa20.19■□□□□ 0.82
TRAPPC9-214ENST00000523777 UFL1O94874 794 aa20.19■□□□□ 0.82
TRAPPC9-214ENST00000523777 EIF6P56537 245 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-214ENST00000523777 POLLQ9UGP5 575 aa20.19■□□□□ 0.82
TRAPPC9-214ENST00000523777 FBXO3Q9UK99 471 aa20.19■□□□□ 0.82
TRAPPC9-214ENST00000523777 AOC3Q16853 763 aa20.18■□□□□ 0.82
TRAPPC9-214ENST00000523777 DUOX1Q9NRD9 1551 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 G3V3G9 751 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 RLBP1P12271 317 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 CHRNDQ07001 517 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 MTX1Q13505 466 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 ZNRF3Q9ULT6 936 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 DDX19BQ9UMR2 479 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 MROH5Q6ZUA9 1318 aa20.17■□□□□ 0.82
TRAPPC9-214ENST00000523777 ZBTB7BO15156 539 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC9-214ENST00000523777 KCNJ4P48050 445 aa20.16■□□□□ 0.82
TRAPPC9-214ENST00000523777 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
TRAPPC9-214ENST00000523777 SLC51AQ86UW1 340 aa20.16■□□□□ 0.82
TRAPPC9-214ENST00000523777 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
TRAPPC9-214ENST00000523777 ZNF594Q96JF6 807 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC9-214ENST00000523777 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
TRAPPC9-214ENST00000523777 MED23Q9ULK4 1368 aa20.14■□□□□ 0.81
TRAPPC9-214ENST00000523777 GPC2Q8N158 579 aa20.14■□□□□ 0.81
TRAPPC9-214ENST00000523777 RIPOR2Q9Y4F9 1068 aa20.14■□□□□ 0.81
TRAPPC9-214ENST00000523777 RIMBP2O15034 1052 aa20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 SRGAP3O43295 1099 aa20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 PLIN1O60240 522 aa20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 CIAO1O76071 339 aa20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 TNIP1Q15025 636 aa20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC9-214ENST00000523777 EYA2O00167 538 aa20.12■□□□□ 0.81
TRAPPC9-214ENST00000523777 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC9-214ENST00000523777 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
TRAPPC9-214ENST00000523777 C15orf52Q6ZUT6 534 aaKnown RBP20.12■□□□□ 0.81
TRAPPC9-214ENST00000523777 COPRSQ9NQ92 184 aa20.12■□□□□ 0.81
TRAPPC9-214ENST00000523777 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
TRAPPC9-214ENST00000523777 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC9-214ENST00000523777 METTL24Q5JXM2 366 aa20.11■□□□□ 0.81
TRAPPC9-214ENST00000523777 PODNQ7Z5L7 613 aa20.11■□□□□ 0.81
TRAPPC9-214ENST00000523777 COG6Q9Y2V7 657 aa20.11■□□□□ 0.81
TRAPPC9-214ENST00000523777 A0A1B0GUL6 1792 aa20.11■□□□□ 0.81
TRAPPC9-214ENST00000523777 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
TRAPPC9-214ENST00000523777 CIAPIN1Q6FI81 312 aa20.1■□□□□ 0.81
TRAPPC9-214ENST00000523777 L3MBTL3Q96JM7 780 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC9-214ENST00000523777 PUS3Q9BZE2 481 aaKnown RBP20.1■□□□□ 0.81
TRAPPC9-214ENST00000523777 COA1Q9GZY4 146 aa20.1■□□□□ 0.81
TRAPPC9-214ENST00000523777 COL4A5P29400 1685 aa20.1■□□□□ 0.81
TRAPPC9-214ENST00000523777 ZNF541Q9H0D2 1346 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 ECE2O60344 883 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 TAF5LO75529 589 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 DDNO94850 711 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 PDE8BO95263 885 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 IL15P40933 162 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 RRP1P56182 461 aaKnown RBP20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 LRRC24Q50LG9 513 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 SCN4AP35499 1836 aa20.09■□□□□ 0.81
TRAPPC9-214ENST00000523777 CXCL9Q07325 125 aa20.08■□□□□ 0.81
TRAPPC9-214ENST00000523777 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC9-214ENST00000523777 KLHDC4Q8TBB5 520 aa20.08■□□□□ 0.81
TRAPPC9-214ENST00000523777 CEP126Q9P2H0 1117 aa20.08■□□□□ 0.81
TRAPPC9-214ENST00000523777 DOK7Q18PE1 504 aa20.07■□□□□ 0.8
TRAPPC9-214ENST00000523777 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
TRAPPC9-214ENST00000523777 GPR101Q96P66 508 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-214ENST00000523777 RRAGCQ9HB90 399 aa20.07■□□□□ 0.8
TRAPPC9-214ENST00000523777 GJA3Q9Y6H8 435 aa20.07■□□□□ 0.8
TRAPPC9-214ENST00000523777 LMOD1P29536 600 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-214ENST00000523777 PUM3Q15397 648 aaKnown RBP20.06■□□□□ 0.8
TRAPPC9-214ENST00000523777 RPAP2Q8IXW5 612 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-214ENST00000523777 SSH3Q8TE77 659 aa20.06■□□□□ 0.8
TRAPPC9-214ENST00000523777 NMRK2Q9NPI5 230 aa20.06■□□□□ 0.8
TRAPPC9-214ENST00000523777 ZBTB40Q9NUA8 1239 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms