RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 ALKQ9UM73 1620 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 PRAMEF22A3QJZ6 481 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 WTAPQ15007 396 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 TFCP2L1Q9NZI6 479 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 CEP131Q9UPN4 1083 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 ERBB3P21860 1342 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 ZBTB43O43298 467 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 ZNF853P0CG23 659 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 NLRP5P59047 1200 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 RRAGDQ9NQL2 400 aaPredicted RBP15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 PRC1O43663 620 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 VAT1LQ9HCJ6 419 aa15.21■□□□□ 0.03
PCDHGB1-201ENST00000523390 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.02
PCDHGB1-201ENST00000523390 BEND3Q5T5X7 828 aa15.21■□□□□ 0.02
PCDHGB1-201ENST00000523390 SSH3Q8TE77 659 aa15.21■□□□□ 0.02
PCDHGB1-201ENST00000523390 CCDC87Q9NVE4 849 aa15.21■□□□□ 0.02
PCDHGB1-201ENST00000523390 DACH1Q9UI36 760 aa15.21■□□□□ 0.02
PCDHGB1-201ENST00000523390 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.02
PCDHGB1-201ENST00000523390 ZNF335Q9H4Z2 1342 aaPredicted RBP15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 RBM25P49756 843 aaKnown RBP15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 STIM1Q13586 685 aa15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 KLHL40Q2TBA0 621 aa15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 ADGRB3O60242 1522 aa15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 WWC3Q9ULE0 1092 aa15.2■□□□□ 0.02
PCDHGB1-201ENST00000523390 RBM10P98175 930 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 ABCA6Q8N139 1617 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 SGSM2O43147 1006 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 PDE8AO60658 829 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 DTNBO60941 627 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 GSPT1P15170 499 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 ZNF76P36508 570 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 XAGE2Q96GT9 111 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 RAD50Q92878 1312 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 CCDC194A0A1B0GVG4 234 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 PARP10Q53GL7 1025 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 KLHL10Q6JEL2 608 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 ESR2Q92731 530 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
PCDHGB1-201ENST00000523390 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 BIN1O00499 593 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 TAF5LO75529 589 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 UBE2HP62256 183 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 GOLGA6L1Q8N7Z2 621 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 KRT23Q9C075 422 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 DNM1Q05193 864 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 KIF24Q5T7B8 1368 aa15.18■□□□□ 0.02
PCDHGB1-201ENST00000523390 ALG1Q9BT22 464 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 ASAP1Q9ULH1 1129 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 MAGEB6P1A0A0J9YX57 407 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 ANO10Q9NW15 660 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 CCDC70Q6NSX1 233 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 DHX32Q7L7V1 743 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 EAF2Q96CJ1 260 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB1-201ENST00000523390 MBD4O95243 580 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 KIF5BP33176 963 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 RUFY3Q7L099 469 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 UBE2Q2Q8WVN8 375 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 PPRC1Q5VV67 1664 aaKnown RBP15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 RXRAP19793 462 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 GIMAP6Q6P9H5 292 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 USP48Q86UV5 1035 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 KDRP35968 1356 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 F13A1P00488 732 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 RTN1Q16799 776 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 CNNM2Q9H8M5 875 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 USP21Q9UK80 565 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 CARD10Q9BWT7 1032 aa15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
PCDHGB1-201ENST00000523390 AOX1Q06278 1338 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 RAB3GAP1Q15042 981 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 IFIT1BQ5T764 474 aaKnown RBP15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 CNNM3Q8NE01 707 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 DIP2CQ9Y2E4 1556 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 GSTO1P78417 241 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 CNBD1Q8NA66 436 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 SMTNL1A8MU46 457 aa15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
PCDHGB1-201ENST00000523390 PICALMQ13492 652 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms