RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 BEND3Q5T5X7 828 aa23.83■■□□□ 1.41
SPIDR-220ENST00000522900 USP50Q70EL3 339 aaPredicted RBP23.83■■□□□ 1.41
SPIDR-220ENST00000522900 CREBZFQ9NS37 354 aa23.83■■□□□ 1.41
SPIDR-220ENST00000522900 ZBTB12Q9Y330 459 aaPredicted RBP23.83■■□□□ 1.41
SPIDR-220ENST00000522900 SHTN1A0MZ66 631 aa23.82■■□□□ 1.4
SPIDR-220ENST00000522900 ECE2O60344 883 aa23.82■■□□□ 1.4
SPIDR-220ENST00000522900 CDC5LQ99459 802 aaKnown RBP23.82■■□□□ 1.4
SPIDR-220ENST00000522900 PLA2G12BQ9BX93 195 aa23.82■■□□□ 1.4
SPIDR-220ENST00000522900 ZC3H12CQ9C0D7 883 aaKnown RBP23.82■■□□□ 1.4
SPIDR-220ENST00000522900 ADARB2Q9NS39 739 aaKnown RBP23.82■■□□□ 1.4
SPIDR-220ENST00000522900 GGA1Q9UJY5 639 aa23.82■■□□□ 1.4
SPIDR-220ENST00000522900 PSMD14O00487 310 aa23.81■■□□□ 1.4
SPIDR-220ENST00000522900 FMR1Q06787 632 aaKnown RBP eCLIP23.81■■□□□ 1.4
SPIDR-220ENST00000522900 BCL2L13Q9BXK5 485 aa23.81■■□□□ 1.4
SPIDR-220ENST00000522900 CSF1RP07333 972 aa23.8■■□□□ 1.4
SPIDR-220ENST00000522900 BSDC1Q9NW68 430 aaPredicted RBP23.8■■□□□ 1.4
SPIDR-220ENST00000522900 MINPP1Q9UNW1 487 aa23.8■■□□□ 1.4
SPIDR-220ENST00000522900 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
SPIDR-220ENST00000522900 HIRAP54198 1017 aaPredicted RBP23.79■■□□□ 1.4
SPIDR-220ENST00000522900 SLFN5Q08AF3 891 aa23.79■■□□□ 1.4
SPIDR-220ENST00000522900 CDCA7LQ96GN5 454 aa23.79■■□□□ 1.4
SPIDR-220ENST00000522900 MKRN1Q9UHC7 482 aaKnown RBP23.79■■□□□ 1.4
SPIDR-220ENST00000522900 CNOT7Q9UIV1 285 aaKnown RBP23.79■■□□□ 1.4
SPIDR-220ENST00000522900 TMEM88BA6NKF7 163 aa23.78■■□□□ 1.4
SPIDR-220ENST00000522900 E9PSI1 815 aa23.78■■□□□ 1.4
SPIDR-220ENST00000522900 ITGA6P23229 1130 aa23.78■■□□□ 1.4
SPIDR-220ENST00000522900 FAM161AQ3B820 660 aa23.78■■□□□ 1.4
SPIDR-220ENST00000522900 XDHP47989 1333 aa23.78■■□□□ 1.4
SPIDR-220ENST00000522900 CCER2I3L3R5 266 aa23.77■■□□□ 1.4
SPIDR-220ENST00000522900 ATP2B4P23634 1241 aa23.77■■□□□ 1.4
SPIDR-220ENST00000522900 FOXO4P98177 505 aa23.77■■□□□ 1.4
SPIDR-220ENST00000522900 TRAF5O00463 557 aa23.76■■□□□ 1.39
SPIDR-220ENST00000522900 SLC4A10Q6U841 1118 aa23.76■■□□□ 1.39
SPIDR-220ENST00000522900 MICALL2Q8IY33 904 aa23.76■■□□□ 1.39
SPIDR-220ENST00000522900 MRPL50Q8N5N7 158 aaKnown RBP23.76■■□□□ 1.39
SPIDR-220ENST00000522900 TRPM4Q8TD43 1214 aa23.76■■□□□ 1.39
SPIDR-220ENST00000522900 G3V3G9 751 aa23.75■■□□□ 1.39
SPIDR-220ENST00000522900 EPHA10Q5JZY3 1008 aa23.75■■□□□ 1.39
SPIDR-220ENST00000522900 DCAF8Q5TAQ9 597 aa23.75■■□□□ 1.39
SPIDR-220ENST00000522900 DPF2Q92785 391 aa23.75■■□□□ 1.39
SPIDR-220ENST00000522900 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
SPIDR-220ENST00000522900 IGHMBP2P38935 993 aaKnown RBP23.74■■□□□ 1.39
SPIDR-220ENST00000522900 PGAP2Q9UHJ9 254 aa23.74■■□□□ 1.39
SPIDR-220ENST00000522900 H7C1D1 291 aa23.73■■□□□ 1.39
SPIDR-220ENST00000522900 VIL1P09327 827 aaKnown RBP23.73■■□□□ 1.39
SPIDR-220ENST00000522900 SAMD7Q7Z3H4 446 aa23.73■■□□□ 1.39
SPIDR-220ENST00000522900 SSH1Q8WYL5 1049 aa23.73■■□□□ 1.39
SPIDR-220ENST00000522900 GRM8O00222 908 aa23.72■■□□□ 1.39
SPIDR-220ENST00000522900 ALDH1L1O75891 902 aa23.72■■□□□ 1.39
SPIDR-220ENST00000522900 EGFRP00533 1210 aa23.72■■□□□ 1.39
SPIDR-220ENST00000522900 CCT4P50991 539 aaKnown RBP23.72■■□□□ 1.39
SPIDR-220ENST00000522900 SRCIN1Q9C0H9 1055 aa23.72■■□□□ 1.39
SPIDR-220ENST00000522900 CNTNAP1P78357 1384 aa23.71■■□□□ 1.39
SPIDR-220ENST00000522900 CST9Q5W186 159 aa23.71■■□□□ 1.39
SPIDR-220ENST00000522900 LMBR1LQ6UX01 489 aa23.71■■□□□ 1.39
SPIDR-220ENST00000522900 TXNRD3Q86VQ6 643 aa23.71■■□□□ 1.39
SPIDR-220ENST00000522900 TRMT2AQ8IZ69 625 aaKnown RBP23.71■■□□□ 1.39
SPIDR-220ENST00000522900 MPHOSPH8Q99549 860 aa23.71■■□□□ 1.39
SPIDR-220ENST00000522900 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
SPIDR-220ENST00000522900 ANKRD18BA2A2Z9 1011 aa23.7■■□□□ 1.38
SPIDR-220ENST00000522900 RPS12P25398 132 aaKnown RBP23.7■■□□□ 1.38
SPIDR-220ENST00000522900 TBC1D10BQ4KMP7 808 aaPredicted RBP23.7■■□□□ 1.38
SPIDR-220ENST00000522900 RBM26Q5T8P6 1007 aaKnown RBP23.7■■□□□ 1.38
SPIDR-220ENST00000522900 GLIS2Q9BZE0 524 aaPredicted RBP23.7■■□□□ 1.38
SPIDR-220ENST00000522900 CHMP3Q9Y3E7 222 aa23.7■■□□□ 1.38
SPIDR-220ENST00000522900 MYH3P11055 1940 aa23.7■■□□□ 1.38
SPIDR-220ENST00000522900 VEGFBP49765 207 aa23.69■■□□□ 1.38
SPIDR-220ENST00000522900 ZC3H15Q8WU90 426 aaKnown RBP23.69■■□□□ 1.38
SPIDR-220ENST00000522900 KLRK1P26718 216 aa23.68■■□□□ 1.38
SPIDR-220ENST00000522900 CHRNDQ07001 517 aa23.68■■□□□ 1.38
SPIDR-220ENST00000522900 IFIT5Q13325 482 aaKnown RBP23.68■■□□□ 1.38
SPIDR-220ENST00000522900 DLK2Q6UY11 383 aa23.68■■□□□ 1.38
SPIDR-220ENST00000522900 PODNQ7Z5L7 613 aa23.68■■□□□ 1.38
SPIDR-220ENST00000522900 LEMD3Q9Y2U8 911 aa23.68■■□□□ 1.38
SPIDR-220ENST00000522900 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 SCN9AQ15858 1988 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 SNAP23O00161 211 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 NBPF7P0C2Y1 421 aaPredicted RBP23.67■■□□□ 1.38
SPIDR-220ENST00000522900 DEFB115Q30KQ5 88 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 RSBN1LQ6PCB5 846 aaPredicted RBP23.67■■□□□ 1.38
SPIDR-220ENST00000522900 HELBQ8NG08 1087 aaPredicted RBP23.67■■□□□ 1.38
SPIDR-220ENST00000522900 KAZALD1Q96I82 304 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 SUCLG2Q96I99 432 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 ZNF594Q96JF6 807 aaPredicted RBP23.67■■□□□ 1.38
SPIDR-220ENST00000522900 ANKRD2Q9GZV1 360 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 ABT1Q9ULW3 272 aaKnown RBP23.67■■□□□ 1.38
SPIDR-220ENST00000522900 SPEF2Q9C093 1822 aa23.67■■□□□ 1.38
SPIDR-220ENST00000522900 ZNF804BA4D1E1 1349 aa23.66■■□□□ 1.38
SPIDR-220ENST00000522900 RASSF10A6NK89 507 aa23.66■■□□□ 1.38
SPIDR-220ENST00000522900 HSPA1AP0DMV8 641 aaKnown RBP23.66■■□□□ 1.38
SPIDR-220ENST00000522900 HSPA1BP0DMV9 641 aaKnown RBP23.66■■□□□ 1.38
SPIDR-220ENST00000522900 USP17L3A6NCW0 530 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 USP17L4A6NCW7 530 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 TAF5LO75529 589 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 USP17L1Q7RTZ2 530 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 USP48Q86UV5 1035 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 GMLQ99445 158 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 MXD3Q9BW11 206 aa23.65■■□□□ 1.38
SPIDR-220ENST00000522900 PTPRCP08575 1304 aa23.64■■□□□ 1.38
SPIDR-220ENST00000522900 CDC37L1Q7L3B6 337 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms