RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 DEFB115Q30KQ5 88 aa13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 TBC1D16Q8TBP0 767 aa13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 EYA3Q99504 573 aa13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
CTNNA1-235ENST00000522730 LAMB2P55268 1798 aa13.12□□□□□ -0.31
CTNNA1-235ENST00000522730 H7C1D1 291 aa13.12□□□□□ -0.31
CTNNA1-235ENST00000522730 CAPN15O75808 1086 aa13.12□□□□□ -0.31
CTNNA1-235ENST00000522730 UFL1O94874 794 aa13.12□□□□□ -0.31
CTNNA1-235ENST00000522730 IGKV5-2P06315 115 aa13.12□□□□□ -0.31
CTNNA1-235ENST00000522730 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-235ENST00000522730 CNTNAP1P78357 1384 aa13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 PSMD14O00487 310 aa13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 ECE2O60344 883 aa13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 FKBP5Q13451 457 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
CTNNA1-235ENST00000522730 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 IL16Q14005 1332 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
CTNNA1-235ENST00000522730 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 CELF2O95319 508 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 CTSWP56202 376 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 FLIIQ13045 1269 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 LTBP1Q14766 1721 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 CST9Q5W186 159 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-235ENST00000522730 WTIPA6NIX2 430 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 VAMP4O75379 141 aa13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 DLK2Q6UY11 383 aa13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 GREM2Q9H772 168 aa13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-235ENST00000522730 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 H7C1W4 665 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 FOXN1O15353 648 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 GCKRQ14397 625 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 DNAAF4Q8WXU2 420 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 COL4A1P02462 1669 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
CTNNA1-235ENST00000522730 ATP2B4P23634 1241 aa13.06□□□□□ -0.32
CTNNA1-235ENST00000522730 CDC37L1Q7L3B6 337 aa13.06□□□□□ -0.32
CTNNA1-235ENST00000522730 DPF2Q92785 391 aa13.06□□□□□ -0.32
CTNNA1-235ENST00000522730 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
CTNNA1-235ENST00000522730 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
CTNNA1-235ENST00000522730 XDHP47989 1333 aa13.06□□□□□ -0.32
CTNNA1-235ENST00000522730 F6X3S4 739 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 EGFRP00533 1210 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 ZC3H15Q8WU90 426 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 PGAP2Q9UHJ9 254 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
CTNNA1-235ENST00000522730 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 AOC2O75106 756 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 RPS12P25398 132 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 ECE1P42892 770 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 LBX1P52954 281 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 MPHOSPH8Q99549 860 aa13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 BSDC1Q9NW68 430 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-235ENST00000522730 ITGA6P23229 1130 aa13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 SLC4A10Q6U841 1118 aa13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
CTNNA1-235ENST00000522730 USP17L3A6NCW0 530 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 USP17L4A6NCW7 530 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 ADM5C9JUS6 153 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 KCNJ4P48050 445 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 CCT4P50991 539 aaKnown RBP13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 RSBN1LQ6PCB5 846 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms