RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 GPKOWQ92917 476 aaPredicted RBP eCLIP8.7□□□□□ -1.02
PABPC1-220ENST00000522658 SIN3AQ96ST3 1273 aa8.7□□□□□ -1.02
PABPC1-220ENST00000522658 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-220ENST00000522658 CGNL1Q0VF96 1302 aa8.7□□□□□ -1.02
PABPC1-220ENST00000522658 UTRNP46939 3433 aa8.7□□□□□ -1.02
PABPC1-220ENST00000522658 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 FSHRP23945 695 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 KCNQ4P56696 695 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 RSPH6AQ9H0K4 717 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 SLC12A5Q9H2X9 1139 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 PCDH11XQ9BZA7 1347 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 PCDH11YQ9BZA8 1340 aa8.69□□□□□ -1.02
PABPC1-220ENST00000522658 HOXC9P31274 260 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 CTDSPL2Q05D32 466 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
PABPC1-220ENST00000522658 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
PABPC1-220ENST00000522658 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 ATP10DQ9P241 1426 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 CD163L1Q9NR16 1453 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 TUBGCP6Q96RT7 1819 aa8.68□□□□□ -1.02
PABPC1-220ENST00000522658 MAN1A2O60476 641 aa8.67□□□□□ -1.02
PABPC1-220ENST00000522658 MEGF6O75095 1541 aa8.67□□□□□ -1.02
PABPC1-220ENST00000522658 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
PABPC1-220ENST00000522658 PALLDQ8WX93 1383 aa8.67□□□□□ -1.02
PABPC1-220ENST00000522658 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
PABPC1-220ENST00000522658 LY75O60449 1722 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 SHANK3Q9BYB0 1731 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 C5P01031 1676 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 MAGEB6P1A0A0J9YX57 407 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 BMP2P12643 396 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 CCDC116Q8IYX3 515 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 PUS7Q96PZ0 661 aaKnown RBP8.66□□□□□ -1.02
PABPC1-220ENST00000522658 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
PABPC1-220ENST00000522658 YBX3P16989 372 aaKnown RBP eCLIP8.65□□□□□ -1.02
PABPC1-220ENST00000522658 RRS1Q15050 365 aaKnown RBP8.65□□□□□ -1.02
PABPC1-220ENST00000522658 PDXDC2PQ6P474 469 aa8.65□□□□□ -1.02
PABPC1-220ENST00000522658 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
PABPC1-220ENST00000522658 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-220ENST00000522658 NSD2O96028 1365 aa8.64□□□□□ -1.03
PABPC1-220ENST00000522658 FLT4P35916 1363 aa8.64□□□□□ -1.03
PABPC1-220ENST00000522658 UPP2O95045 317 aa8.64□□□□□ -1.03
PABPC1-220ENST00000522658 TMF1P82094 1093 aa8.64□□□□□ -1.03
PABPC1-220ENST00000522658 CDCA8Q53HL2 280 aa8.64□□□□□ -1.03
PABPC1-220ENST00000522658 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
PABPC1-220ENST00000522658 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.64□□□□□ -1.03
PABPC1-220ENST00000522658 IGSF1Q8N6C5 1336 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
PABPC1-220ENST00000522658 Q6ZVU0 165 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 GGNBP2Q9H3C7 697 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 COL24A1Q17RW2 1714 aa8.63□□□□□ -1.03
PABPC1-220ENST00000522658 PPM1GO15355 546 aaPredicted RBP8.62□□□□□ -1.03
PABPC1-220ENST00000522658 HSPA6P17066 643 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 SSFA2P28290 1259 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
PABPC1-220ENST00000522658 PPP2R2DQ66LE6 453 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 OCSTAMPQ9BR26 566 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 TMOD3Q9NYL9 352 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 FKBPLQ9UIM3 349 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 C4BP0C0L5 1744 aa8.62□□□□□ -1.03
PABPC1-220ENST00000522658 INSRP06213 1382 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 KIF20BQ96Q89 1820 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 RGPD2P0DJD1 1756 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 C16orf71Q8IYS4 520 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-220ENST00000522658 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
PABPC1-220ENST00000522658 GOLGB1Q14789 3259 aaKnown RBP8.61□□□□□ -1.03
PABPC1-220ENST00000522658 CBLBQ13191 982 aa8.6□□□□□ -1.03
PABPC1-220ENST00000522658 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-220ENST00000522658 ARHGAP9Q9BRR9 750 aa8.6□□□□□ -1.03
PABPC1-220ENST00000522658 ZC3H4Q9UPT8 1303 aaKnown RBP8.59□□□□□ -1.03
PABPC1-220ENST00000522658 SPINT1O43278 529 aa8.59□□□□□ -1.03
PABPC1-220ENST00000522658 FBLN1P23142 703 aa8.59□□□□□ -1.03
PABPC1-220ENST00000522658 NR6A1Q15406 480 aa8.59□□□□□ -1.03
PABPC1-220ENST00000522658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.031e-19■□□□□ 9.7
PABPC1-220ENST00000522658 KCTD15Q96SI1 283 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-220ENST00000522658 ADCY9O60503 1353 aa8.59□□□□□ -1.03
PABPC1-220ENST00000522658 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 SIK1P57059 783 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 HSP90AB2PQ58FF8 381 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
PABPC1-220ENST00000522658 BCS1LQ9Y276 419 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
PABPC1-220ENST00000522658 TAF1LQ8IZX4 1826 aa8.58□□□□□ -1.04
PABPC1-220ENST00000522658 FYB1O15117 783 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms