RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 COL4A1P02462 1669 aa23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 PSMD14O00487 310 aa23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 VEGFBP49765 207 aa23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 EXOSC9Q06265 439 aaKnown RBP23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 DOK7Q18PE1 504 aa23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 DPF2Q92785 391 aa23.6■■□□□ 1.37
TOP1MT-216ENST00000522121 RASSF10A6NK89 507 aa23.59■■□□□ 1.37
TOP1MT-216ENST00000522121 VAMP4O75379 141 aa23.59■■□□□ 1.37
TOP1MT-216ENST00000522121 TTLL11Q8NHH1 800 aa23.59■■□□□ 1.37
TOP1MT-216ENST00000522121 ZC3H15Q8WU90 426 aaKnown RBP23.59■■□□□ 1.37
TOP1MT-216ENST00000522121 GPR101Q96P66 508 aaPredicted RBP23.59■■□□□ 1.37
TOP1MT-216ENST00000522121 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
TOP1MT-216ENST00000522121 H7C1W4 665 aa23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 RPS12P25398 132 aaKnown RBP23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 COL13A1Q5TAT6 717 aaPredicted RBP23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 UBE3BQ7Z3V4 1068 aa23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 MICALL2Q8IY33 904 aa23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 DNAAF4Q8WXU2 420 aa23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 ZBTB12Q9Y330 459 aaPredicted RBP23.58■■□□□ 1.37
TOP1MT-216ENST00000522121 XDHP47989 1333 aa23.58■■□□□ 1.36
TOP1MT-216ENST00000522121 TRAF5O00463 557 aa23.57■■□□□ 1.36
TOP1MT-216ENST00000522121 GCKRQ14397 625 aa23.57■■□□□ 1.36
TOP1MT-216ENST00000522121 PGAP2Q9UHJ9 254 aa23.57■■□□□ 1.36
TOP1MT-216ENST00000522121 FMR1Q06787 632 aaKnown RBP eCLIP23.56■■□□□ 1.36
TOP1MT-216ENST00000522121 LINS1Q8NG48 757 aa23.56■■□□□ 1.36
TOP1MT-216ENST00000522121 GREM2Q9H772 168 aa23.56■■□□□ 1.36
TOP1MT-216ENST00000522121 ATP2B4P23634 1241 aa23.55■■□□□ 1.36
TOP1MT-216ENST00000522121 HIRAP54198 1017 aaPredicted RBP23.55■■□□□ 1.36
TOP1MT-216ENST00000522121 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
TOP1MT-216ENST00000522121 KCNQ5Q9NR82 932 aa23.55■■□□□ 1.36
TOP1MT-216ENST00000522121 BSDC1Q9NW68 430 aaPredicted RBP23.55■■□□□ 1.36
TOP1MT-216ENST00000522121 PCNTO95613 3336 aa23.54■■□□□ 1.36
TOP1MT-216ENST00000522121 RTL9Q8NET4 1388 aa23.54■■□□□ 1.36
TOP1MT-216ENST00000522121 CDC37L1Q7L3B6 337 aa23.54■■□□□ 1.36
TOP1MT-216ENST00000522121 AIDAQ96BJ3 306 aa23.54■■□□□ 1.36
TOP1MT-216ENST00000522121 SHTN1A0MZ66 631 aa23.53■■□□□ 1.36
TOP1MT-216ENST00000522121 CST9Q5W186 159 aa23.53■■□□□ 1.36
TOP1MT-216ENST00000522121 PLA2G12BQ9BX93 195 aa23.53■■□□□ 1.36
TOP1MT-216ENST00000522121 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
TOP1MT-216ENST00000522121 SPINK5Q9NQ38 1064 aaPredicted RBP23.53■■□□□ 1.36
TOP1MT-216ENST00000522121 VIL1P09327 827 aaKnown RBP23.52■■□□□ 1.36
TOP1MT-216ENST00000522121 IGHMBP2P38935 993 aaKnown RBP23.52■■□□□ 1.36
TOP1MT-216ENST00000522121 PAXIP1Q6ZW49 1069 aaPredicted RBP23.52■■□□□ 1.36
TOP1MT-216ENST00000522121 SAMD7Q7Z3H4 446 aa23.52■■□□□ 1.36
TOP1MT-216ENST00000522121 WDR33Q9C0J8 1336 aaKnown RBP23.52■■□□□ 1.36
TOP1MT-216ENST00000522121 CELF2O95319 508 aaKnown RBP23.51■■□□□ 1.35
TOP1MT-216ENST00000522121 ECE1P42892 770 aa23.51■■□□□ 1.35
TOP1MT-216ENST00000522121 TBC1D10BQ4KMP7 808 aaPredicted RBP23.51■■□□□ 1.35
TOP1MT-216ENST00000522121 TNS4Q8IZW8 715 aa23.51■■□□□ 1.35
TOP1MT-216ENST00000522121 MINPP1Q9UNW1 487 aa23.51■■□□□ 1.35
TOP1MT-216ENST00000522121 TLL2Q9Y6L7 1015 aa23.51■■□□□ 1.35
TOP1MT-216ENST00000522121 ITGA6P23229 1130 aa23.49■■□□□ 1.35
TOP1MT-216ENST00000522121 CASP7P55210 303 aa23.49■■□□□ 1.35
TOP1MT-216ENST00000522121 RBM26Q5T8P6 1007 aaKnown RBP23.49■■□□□ 1.35
TOP1MT-216ENST00000522121 PODNQ7Z5L7 613 aa23.49■■□□□ 1.35
TOP1MT-216ENST00000522121 FOXN1O15353 648 aa23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 MAP2K1Q02750 393 aaPredicted RBP23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 AGBL3Q8NEM8 1001 aa23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 CAPNS2Q96L46 248 aa23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 MPHOSPH8Q99549 860 aa23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 ZNF408Q9H9D4 720 aa23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 WBP1LQ9NX94 342 aa23.48■■□□□ 1.35
TOP1MT-216ENST00000522121 F6X3S4 739 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 CSF1RP07333 972 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 GRM1Q13255 1194 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 RSBN1LQ6PCB5 846 aaPredicted RBP23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 USP48Q86UV5 1035 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 DCPSQ96C86 337 aaKnown RBP23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 MED23Q9ULK4 1368 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 CACNA1FO60840 1977 aa23.47■■□□□ 1.35
TOP1MT-216ENST00000522121 MYH3P11055 1940 aa23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 CTCFP49711 727 aaPredicted RBP23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 KIF4BQ2VIQ3 1234 aa23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 BEND3Q5T5X7 828 aa23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 ANKRD2Q9GZV1 360 aa23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 LEMD3Q9Y2U8 911 aa23.46■■□□□ 1.35
TOP1MT-216ENST00000522121 TRPM7Q96QT4 1865 aa23.45■■□□□ 1.35
TOP1MT-216ENST00000522121 ANKRD18BA2A2Z9 1011 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 USP17L3A6NCW0 530 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 USP17L4A6NCW7 530 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 EGFRP00533 1210 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 CYP4F22Q6NT55 531 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 USP17L1Q7RTZ2 530 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 SAPCD2Q86UD0 394 aa23.45■■□□□ 1.34
TOP1MT-216ENST00000522121 ZNF609O15014 1411 aa23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 ZNF521Q96K83 1311 aa23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 WTIPA6NIX2 430 aaPredicted RBP23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 ZNF280AP59817 542 aaPredicted RBP23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 HHIPL1Q96JK4 782 aa23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 PRDM10Q9NQV6 1147 aa23.43■■□□□ 1.34
TOP1MT-216ENST00000522121 USP17L8P0C7I0 530 aa23.42■■□□□ 1.34
TOP1MT-216ENST00000522121 KCNJ4P48050 445 aa23.42■■□□□ 1.34
TOP1MT-216ENST00000522121 IFIT5Q13325 482 aaKnown RBP23.42■■□□□ 1.34
TOP1MT-216ENST00000522121 BEGAINQ9BUH8 593 aa23.42■■□□□ 1.34
TOP1MT-216ENST00000522121 CHMP3Q9Y3E7 222 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms