RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	GGCX	P38435	758 aa		10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	MLEC	Q14165	292 aa		10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	LCE2D	Q5TA82	110 aa	Predicted RBP	10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	PPP1R18	Q6NYC8	613 aa		10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	KDF1	Q8NAX2	398 aa	Predicted RBP	10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	PMFBP1	Q8TBY8	1022 aa		10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	A2M	P01023	1474 aa		10.15	□□□□□ -0.78
SPIDR-215	ENST00000521798	ABCC5	O15440	1437 aa		10.15	□□□□□ -0.79
SPIDR-215	ENST00000521798	MADD	Q8WXG6	1647 aa		10.15	□□□□□ -0.79
SPIDR-215	ENST00000521798		A6NHS1	94 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	CD2BP2	O95400	341 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	TSPY4	P0CV99	314 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	TSPY10	P0CW01	314 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	VPS37D	Q86XT2	251 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	MCF2L2	Q86YR7	1114 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	KRTAP3-3	Q9BYR6	98 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	KRTAP3-2	Q9BYR7	98 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	GGT7	Q9UJ14	662 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	MAST1	Q9Y2H9	1570 aa		10.14	□□□□□ -0.79
SPIDR-215	ENST00000521798	PTPRM	P28827	1452 aa		10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	FGR	P09769	529 aa		10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	GJA8	P48165	433 aa		10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	ZNF662	Q6ZS27	426 aa		10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	NIFK	Q9BYG3	293 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	PIF1	Q9H611	641 aa		10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	BCS1L	Q9Y276	419 aa		10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	DHX29	Q7Z478	1369 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-215	ENST00000521798	SHANK2	Q9UPX8	1470 aa		10.12	□□□□□ -0.79
SPIDR-215	ENST00000521798	ST13	P50502	369 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-215	ENST00000521798	OSBPL7	Q9BZF2	842 aa		10.12	□□□□□ -0.79
SPIDR-215	ENST00000521798	TBX22	Q9Y458	520 aa		10.12	□□□□□ -0.79
SPIDR-215	ENST00000521798	DAPK1	P53355	1430 aa		10.12	□□□□□ -0.79
SPIDR-215	ENST00000521798	ADGB	Q8N7X0	1667 aa		10.12	□□□□□ -0.79
SPIDR-215	ENST00000521798	DNMT1	P26358	1616 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	STK10	O94804	968 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	MICAL2	O94851	1124 aa		10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	TAF1C	Q15572	869 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	SDE2	Q6IQ49	451 aa		10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	CCDC74A	Q96AQ1	378 aa		10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	OSBPL2	Q9H1P3	480 aa		10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	ZSWIM4	Q9H7M6	989 aa		10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	FAM8A1	Q9UBU6	413 aa		10.11	□□□□□ -0.79
SPIDR-215	ENST00000521798	CROCC2	H7BZ55	1655 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	RIMS1	Q86UR5	1692 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	TXLNA	P40222	546 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	PTGIR	P43119	386 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	KCNC4	Q03721	635 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	FAM50A	Q14320	339 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	HIF1A	Q16665	826 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	MEI1	Q5TIA1	1274 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	PI16	Q6UXB8	463 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	RHBDD1	Q8TEB9	315 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	NLRP3	Q96P20	1036 aa		10.1	□□□□□ -0.79
SPIDR-215	ENST00000521798	FER1L4	A9Z1Z3	1794 aa		10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	TGFBR3L	H3BV60	316 aa		10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	MEN1	O00255	615 aa		10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	TNFRSF21	O75509	655 aa		10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	ATF4	P18848	351 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	USPL1	Q5W0Q7	1092 aa		10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	EPS8L3	Q8TE67	593 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	SNX29	Q8TEQ0	813 aa		10.09	□□□□□ -0.79
SPIDR-215	ENST00000521798	WNT7A	O00755	349 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	ITGBL1	O95965	494 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	IRS1	P35568	1242 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	PAK2	Q13177	524 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	CBLB	Q13191	982 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	XKR5	Q6UX68	686 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798		Q6ZVU0	165 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	ERMP1	Q7Z2K6	904 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	SRCIN1	Q9C0H9	1055 aa		10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-215	ENST00000521798	PTPRK	Q15262	1439 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	KIF15	Q9NS87	1388 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	USP17L7	P0C7H9	530 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	IER5	Q5VY09	327 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	EGFLAM	Q63HQ2	1017 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	TMEM214	Q6NUQ4	689 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	GGT6	Q6P531	493 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	GPRASP2	Q96D09	838 aa		10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	RRBP1	Q9P2E9	1410 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-215	ENST00000521798	ADGRL2	O95490	1459 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	KIF3B	O15066	747 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	GTF2E1	P29083	439 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	NLGN1	Q8N2Q7	840 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	RHPN1	Q8TCX5	695 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	MRGPRX2	Q96LB1	330 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	RRP7BP	Q9NSQ0	103 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798		V9GY48	417 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	DUOX2	Q9NRD8	1548 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	NCOA1	Q15788	1441 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	CNTLN	Q9NXG0	1405 aa		10.06	□□□□□ -0.8
SPIDR-215	ENST00000521798	ANKRD30A	Q9BXX3	1397 aa		10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	SBNO2	Q9Y2G9	1366 aa		10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	CEBPA	P49715	358 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	NNT	Q13423	1086 aa		10.05	□□□□□ -0.8

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