RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 NSFL1CQ9UNZ2 370 aaKnown RBP5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 UBAP1LF5GYI3 381 aa5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 PCSK2P16519 638 aa5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 ERCC5P28715 1186 aaPredicted RBP5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 MAP2K3P46734 347 aa5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 CMTR1Q8N1G2 835 aaKnown RBP5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 SNX29Q8TEQ0 813 aa5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 CRELD1Q96HD1 420 aa5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 TGIF2Q9GZN2 237 aa5.57□□□□□ -1.52
HMGN1P28-201ENST00000521340 GIPC1O14908 333 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 EREGO14944 169 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 BNIP3LO60238 219 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 NEFLP07196 543 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 GRIN2CQ14957 1233 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 BICDL1Q6ZP65 573 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 SLC43A3Q8NBI5 491 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 GALNT6Q8NCL4 622 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 C3orf58Q8NDZ4 430 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 SREK1Q8WXA9 508 aaKnown RBP5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 RNF34Q969K3 372 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 GMLQ99445 158 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 GSX2Q9BZM3 304 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 C12orf49Q9H741 205 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 VTI1BQ9UEU0 232 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 DDX41Q9UJV9 622 aaKnown RBP5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 SHROOM4Q9ULL8 1493 aa5.56□□□□□ -1.52
HMGN1P28-201ENST00000521340 XYLBO75191 536 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 CYP2E1P05181 493 aaPredicted RBP5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 POLR3DP05423 398 aaPredicted RBP5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 HOXB4P17483 251 aaPredicted RBP5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 ZNF76P36508 570 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 CTBSQ01459 385 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 SFSWAPQ12872 951 aaKnown RBP5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 ARSJQ5FYB0 599 aaPredicted RBP5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 MEI1Q5TIA1 1274 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 PODNQ7Z5L7 613 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 NLRP13Q86W25 1043 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 PGBD3Q8N328 593 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 ABHD17AQ96GS6 310 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 DRC1Q96MC2 740 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 SPOCK3Q9BQ16 436 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 STRN4Q9NRL3 753 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 ZFATQ9P243 1243 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 USP35Q9P2H5 1018 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 SALL4Q9UJQ4 1053 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 PHF24Q9UPV7 400 aa5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 FNDC3AQ9Y2H6 1198 aaKnown RBP5.55□□□□□ -1.52
HMGN1P28-201ENST00000521340 MSTNO14793 375 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 PROCP04070 461 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 FAM157BP0CG42 384 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 TNP2Q05952 138 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 KIAA0319Q5VV43 1072 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 NXPE4Q6UWF7 544 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 ERMP1Q7Z2K6 904 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 ZNF438Q7Z4V0 828 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 ANKRD24Q8TF21 1146 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 EDARADDQ8WWZ3 215 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 ACBD3Q9H3P7 528 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 MRS2Q9HD23 443 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 NPHS2Q9NP85 383 aa5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 ATXN7L1Q9ULK2 861 aaPredicted RBP5.54□□□□□ -1.52
HMGN1P28-201ENST00000521340 A0A1W2PP55 124 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 KRBA1A5PL33 1030 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 PHACTR2O75167 634 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 HOXD8P13378 290 aaPredicted RBP5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 FGFR3P22607 806 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 COL8A1P27658 744 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 TNNI2P48788 182 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 ST13P50502 369 aaKnown RBP5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 GRM2Q14416 872 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 EFHC2Q5JST6 749 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 OR13H1Q8NG92 308 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 CEP63Q96MT8 703 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 BCO2Q9BYV7 579 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 SUV39H2Q9H5I1 410 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 LATS2Q9NRM7 1088 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 ABI2Q9NYB9 513 aaPredicted RBP5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 GDF2Q9UK05 429 aaPredicted RBP5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 SPG7Q9UQ90 795 aa5.53□□□□□ -1.52
HMGN1P28-201ENST00000521340 MMP20O60882 483 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 SASH3O75995 380 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 BMP4P12644 408 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 TARSP26639 723 aaKnown RBP5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 COL13A1Q5TAT6 717 aaPredicted RBP5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 LINC00114Q6XXX2 140 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 TCF12Q99081 682 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 GGA1Q9UJY5 639 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 KCNH4Q9UQ05 1017 aa5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.52□□□□□ -1.53
HMGN1P28-201ENST00000521340 NFKBIEO00221 500 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 KIF4AO95239 1232 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 USP17L7P0C7H9 530 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 TAF1CQ15572 869 aaPredicted RBP5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 PRPF40BQ6NWY9 871 aaKnown RBP5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 GOLGA6L1Q8N7Z2 621 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms