RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 PHLPP1O60346 1717 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 KDRP35968 1356 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 SOBPA7XYQ1 873 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 SPINT1O43278 529 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 CBLBQ13191 982 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 SULT6B1Q6IMI4 303 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 CCDC125Q86Z20 511 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 WWC1Q8IX03 1113 aa10.3□□□□□ -0.76
CTHRC1-203ENST00000520337 COL22A1Q8NFW1 1626 aaPredicted RBP10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 CPDO75976 1380 aa10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 CAMTA1Q9Y6Y1 1673 aa10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 TTLL8A6PVC2 850 aa10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 GMPRP36959 345 aa10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 TRMT2AQ8IZ69 625 aaKnown RBP10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 DNMT3LQ9UJW3 386 aa10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 COL16A1Q07092 1604 aaPredicted RBP10.29□□□□□ -0.76
CTHRC1-203ENST00000520337 ABCC6O95255 1503 aa10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 TOM1O60784 492 aa10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 VEGFBP49765 207 aa10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 SLFN5Q08AF3 891 aa10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 LTV1Q96GA3 475 aaPredicted RBP10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
CTHRC1-203ENST00000520337 NCAPD2Q15021 1401 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 ZBTB7CA1YPR0 619 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 FBXO45P0C2W1 286 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 VSIG8P0DPA2 414 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 NFE2L2Q16236 605 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 DUSP27Q5VZP5 1158 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 WDR63Q8IWG1 891 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 LRRC59Q96AG4 307 aaKnown RBP10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 VIRMAQ69YN4 1812 aaKnown RBP10.27□□□□□ -0.77
CTHRC1-203ENST00000520337 KIAA0232Q92628 1395 aa10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 FAM208AQ9UK61 1670 aaKnown RBP10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 ERVH48-1M5A8F1 160 aa10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 RIPK4P57078 832 aa10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 ZSCAN1Q8NBB4 408 aa10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 ZNF330Q9Y3S2 320 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-203ENST00000520337 FAM181BA6NEQ2 426 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 NR1H3Q13133 447 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 CHRNA2Q15822 529 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 ANKRD24Q8TF21 1146 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 TMPRSS4Q9NRS4 437 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 PCDHB9Q9Y5E1 797 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 ERBB4Q15303 1308 aa10.25□□□□□ -0.77
CTHRC1-203ENST00000520337 E9PSI1 815 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 UBAP1LF5GYI3 381 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 NEFMP07197 916 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 ADH1AP07327 375 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 RAB15P59190 212 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 PIP4K2BP78356 416 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 SUPT16HQ9Y5B9 1047 aaKnown RBP10.24□□□□□ -0.77
CTHRC1-203ENST00000520337 LILRA1O75019 489 aa10.23□□□□□ -0.77
CTHRC1-203ENST00000520337 PPFIA3O75145 1194 aa10.23□□□□□ -0.77
CTHRC1-203ENST00000520337 RELBQ01201 579 aa10.23□□□□□ -0.77
CTHRC1-203ENST00000520337 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
CTHRC1-203ENST00000520337 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
CTHRC1-203ENST00000520337 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
CTHRC1-203ENST00000520337 AGBL1Q96MI9 1066 aa10.22□□□□□ -0.77
CTHRC1-203ENST00000520337 PRDM11Q9NQV5 511 aa10.22□□□□□ -0.77
CTHRC1-203ENST00000520337 IL16Q14005 1332 aa10.22□□□□□ -0.77
CTHRC1-203ENST00000520337 RNF123Q5XPI4 1314 aa10.22□□□□□ -0.77
CTHRC1-203ENST00000520337 COL14A1Q05707 1796 aaKnown RBP10.21□□□□□ -0.77
CTHRC1-203ENST00000520337 THUMPD2Q9BTF0 503 aaKnown RBP10.21□□□□□ -0.77
CTHRC1-203ENST00000520337 SNRKQ9NRH2 765 aa10.21□□□□□ -0.77
CTHRC1-203ENST00000520337 GPR37L1O60883 481 aa10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 COL5A2P05997 1499 aaPredicted RBP10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 PTGIRP43119 386 aa10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 PTSQ03393 145 aa10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 INSM2Q96T92 566 aaPredicted RBP10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 RCAN3Q9UKA8 241 aa10.2□□□□□ -0.78
CTHRC1-203ENST00000520337 ZNF853P0CG23 659 aa10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 ADD1P35611 737 aaKnown RBP10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 CTSOP43234 321 aaPredicted RBP10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 LMOD3Q0VAK6 560 aa10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 DCTN1Q14203 1278 aa10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 GAS2L2Q8NHY3 880 aa10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 POLMQ9NP87 494 aaPredicted RBP10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 NLRP2Q9NX02 1062 aa10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 PKD1L3Q7Z443 1732 aa10.19□□□□□ -0.78
CTHRC1-203ENST00000520337 PLCH1Q4KWH8 1693 aa10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 LRRC37A3O60309 1634 aa10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 WDR17Q8IZU2 1322 aa10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 FIGNL2A6NMB9 653 aa10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 RNF217Q8TC41 542 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms