RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CWF19L2Q2TBE0 894 aaKnown RBP32.38■■■□□ 2.77
VEGFA-220ENST00000519767 TTLL11Q8NHH1 800 aa32.38■■■□□ 2.77
VEGFA-220ENST00000519767 CCDC85AQ96PX6 553 aaPredicted RBP32.38■■■□□ 2.77
VEGFA-220ENST00000519767 PSMD14O00487 310 aa32.37■■■□□ 2.77
VEGFA-220ENST00000519767 ECE2O60344 883 aa32.37■■■□□ 2.77
VEGFA-220ENST00000519767 RPS12P25398 132 aaKnown RBP32.37■■■□□ 2.77
VEGFA-220ENST00000519767 EXOSC9Q06265 439 aaKnown RBP32.37■■■□□ 2.77
VEGFA-220ENST00000519767 FAM9BQ8IZU0 186 aa32.37■■■□□ 2.77
VEGFA-220ENST00000519767 G3V3G9 751 aa32.36■■■□□ 2.77
VEGFA-220ENST00000519767 UFL1O94874 794 aa32.36■■■□□ 2.77
VEGFA-220ENST00000519767 FKBP5Q13451 457 aaPredicted RBP32.36■■■□□ 2.77
VEGFA-220ENST00000519767 DOK7Q18PE1 504 aa32.36■■■□□ 2.77
VEGFA-220ENST00000519767 DCAF8Q5TAQ9 597 aa32.36■■■□□ 2.77
VEGFA-220ENST00000519767 COL13A1Q5TAT6 717 aaPredicted RBP32.36■■■□□ 2.77
VEGFA-220ENST00000519767 MYH16Q9H6N6 1097 aa32.36■■■□□ 2.77
VEGFA-220ENST00000519767 ABT1Q9ULW3 272 aaKnown RBP32.36■■■□□ 2.77
VEGFA-220ENST00000519767 DNAAF4Q8WXU2 420 aa32.35■■■□□ 2.77
VEGFA-220ENST00000519767 XDHP47989 1333 aa32.34■■■□□ 2.77
VEGFA-220ENST00000519767 GCKRQ14397 625 aa32.34■■■□□ 2.77
VEGFA-220ENST00000519767 BSDC1Q9NW68 430 aaPredicted RBP32.34■■■□□ 2.77
VEGFA-220ENST00000519767 HIRAP54198 1017 aaPredicted RBP32.33■■■□□ 2.77
VEGFA-220ENST00000519767 UBE3BQ7Z3V4 1068 aa32.33■■■□□ 2.77
VEGFA-220ENST00000519767 MICALL2Q8IY33 904 aa32.33■■■□□ 2.77
VEGFA-220ENST00000519767 LINS1Q8NG48 757 aa32.33■■■□□ 2.77
VEGFA-220ENST00000519767 ZBTB12Q9Y330 459 aaPredicted RBP32.33■■■□□ 2.77
VEGFA-220ENST00000519767 ATP2B4P23634 1241 aa32.32■■■□□ 2.76
VEGFA-220ENST00000519767 RTL9Q8NET4 1388 aa32.32■■■□□ 2.76
VEGFA-220ENST00000519767 COL4A1P02462 1669 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 TRAF5O00463 557 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 CST9Q5W186 159 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 CDC37L1Q7L3B6 337 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 GPR101Q96P66 508 aaPredicted RBP32.31■■■□□ 2.76
VEGFA-220ENST00000519767 PLA2G12BQ9BX93 195 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 GREM2Q9H772 168 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 KCNQ5Q9NR82 932 aa32.31■■■□□ 2.76
VEGFA-220ENST00000519767 VIL1P09327 827 aaKnown RBP32.3■■■□□ 2.76
VEGFA-220ENST00000519767 FMR1Q06787 632 aaKnown RBP eCLIP32.29■■■□□ 2.76
VEGFA-220ENST00000519767 TRPM4Q8TD43 1214 aa32.29■■■□□ 2.76
VEGFA-220ENST00000519767 SPINK5Q9NQ38 1064 aaPredicted RBP32.28■■■□□ 2.76
VEGFA-220ENST00000519767 MINPP1Q9UNW1 487 aa32.28■■■□□ 2.76
VEGFA-220ENST00000519767 WDR33Q9C0J8 1336 aaKnown RBP32.27■■■□□ 2.76
VEGFA-220ENST00000519767 AIDAQ96BJ3 306 aa32.27■■■□□ 2.76
VEGFA-220ENST00000519767 GLIS2Q9BZE0 524 aaPredicted RBP32.27■■■□□ 2.76
VEGFA-220ENST00000519767 SHTN1A0MZ66 631 aa32.26■■■□□ 2.75
VEGFA-220ENST00000519767 ECE1P42892 770 aa32.26■■■□□ 2.75
VEGFA-220ENST00000519767 PODNQ7Z5L7 613 aa32.26■■■□□ 2.75
VEGFA-220ENST00000519767 TLL2Q9Y6L7 1015 aa32.26■■■□□ 2.75
VEGFA-220ENST00000519767 CSF1RP07333 972 aa32.25■■■□□ 2.75
VEGFA-220ENST00000519767 IGHMBP2P38935 993 aaKnown RBP32.25■■■□□ 2.75
VEGFA-220ENST00000519767 CASP7P55210 303 aa32.25■■■□□ 2.75
VEGFA-220ENST00000519767 SAMD7Q7Z3H4 446 aa32.25■■■□□ 2.75
VEGFA-220ENST00000519767 WBP1LQ9NX94 342 aa32.25■■■□□ 2.75
VEGFA-220ENST00000519767 CELF2O95319 508 aaKnown RBP32.24■■■□□ 2.75
VEGFA-220ENST00000519767 MAP2K1Q02750 393 aaPredicted RBP32.23■■■□□ 2.75
VEGFA-220ENST00000519767 TNS4Q8IZW8 715 aa32.23■■■□□ 2.75
VEGFA-220ENST00000519767 AGBL3Q8NEM8 1001 aa32.23■■■□□ 2.75
VEGFA-220ENST00000519767 CACNA1FO60840 1977 aa32.23■■■□□ 2.75
VEGFA-220ENST00000519767 TBC1D10BQ4KMP7 808 aaPredicted RBP32.22■■■□□ 2.75
VEGFA-220ENST00000519767 FOXN1O15353 648 aa32.21■■■□□ 2.75
VEGFA-220ENST00000519767 ITGA6P23229 1130 aa32.21■■■□□ 2.75
VEGFA-220ENST00000519767 CCT4P50991 539 aaKnown RBP32.21■■■□□ 2.75
VEGFA-220ENST00000519767 RBM26Q5T8P6 1007 aaKnown RBP32.21■■■□□ 2.75
VEGFA-220ENST00000519767 RSBN1LQ6PCB5 846 aaPredicted RBP32.21■■■□□ 2.75
VEGFA-220ENST00000519767 CAPNS2Q96L46 248 aa32.21■■■□□ 2.75
VEGFA-220ENST00000519767 ANKRD2Q9GZV1 360 aa32.21■■■□□ 2.75
VEGFA-220ENST00000519767 LEMD3Q9Y2U8 911 aa32.21■■■□□ 2.75
VEGFA-220ENST00000519767 CTCFP49711 727 aaPredicted RBP32.2■■■□□ 2.75
VEGFA-220ENST00000519767 BEND3Q5T5X7 828 aa32.2■■■□□ 2.75
VEGFA-220ENST00000519767 PAXIP1Q6ZW49 1069 aaPredicted RBP32.2■■■□□ 2.75
VEGFA-220ENST00000519767 SAPCD2Q86UD0 394 aa32.2■■■□□ 2.75
VEGFA-220ENST00000519767 USP48Q86UV5 1035 aa32.2■■■□□ 2.75
VEGFA-220ENST00000519767 DCPSQ96C86 337 aaKnown RBP32.2■■■□□ 2.75
VEGFA-220ENST00000519767 HHIPL1Q96JK4 782 aa32.2■■■□□ 2.75
VEGFA-220ENST00000519767 MPHOSPH8Q99549 860 aa32.2■■■□□ 2.75
VEGFA-220ENST00000519767 USP17L3A6NCW0 530 aa32.19■■■□□ 2.74
VEGFA-220ENST00000519767 USP17L4A6NCW7 530 aa32.19■■■□□ 2.74
VEGFA-220ENST00000519767 USP17L1Q7RTZ2 530 aa32.19■■■□□ 2.74
VEGFA-220ENST00000519767 KRT26Q7Z3Y9 468 aa32.18■■■□□ 2.74
VEGFA-220ENST00000519767 PRDM10Q9NQV6 1147 aa32.18■■■□□ 2.74
VEGFA-220ENST00000519767 MED23Q9ULK4 1368 aa32.18■■■□□ 2.74
VEGFA-220ENST00000519767 F6X3S4 739 aa32.17■■■□□ 2.74
VEGFA-220ENST00000519767 ZNF280AP59817 542 aaPredicted RBP32.17■■■□□ 2.74
VEGFA-220ENST00000519767 KIF4BQ2VIQ3 1234 aa32.17■■■□□ 2.74
VEGFA-220ENST00000519767 ZNF521Q96K83 1311 aa32.17■■■□□ 2.74
VEGFA-220ENST00000519767 ANKRD18BA2A2Z9 1011 aa32.16■■■□□ 2.74
VEGFA-220ENST00000519767 EGFRP00533 1210 aa32.16■■■□□ 2.74
VEGFA-220ENST00000519767 FAM161AQ3B820 660 aa32.16■■■□□ 2.74
VEGFA-220ENST00000519767 CYP4F22Q6NT55 531 aa32.16■■■□□ 2.74
VEGFA-220ENST00000519767 ZNF609O15014 1411 aa32.16■■■□□ 2.74
VEGFA-220ENST00000519767 TRPM7Q96QT4 1865 aa32.15■■■□□ 2.74
VEGFA-220ENST00000519767 MAP2K2P36507 400 aa32.15■■■□□ 2.74
VEGFA-220ENST00000519767 GMLQ99445 158 aa32.15■■■□□ 2.74
VEGFA-220ENST00000519767 COA1Q9GZY4 146 aa32.15■■■□□ 2.74
VEGFA-220ENST00000519767 ZNF408Q9H9D4 720 aa32.15■■■□□ 2.74
VEGFA-220ENST00000519767 WTIPA6NIX2 430 aaPredicted RBP32.14■■■□□ 2.74
VEGFA-220ENST00000519767 USP17L8P0C7I0 530 aa32.14■■■□□ 2.74
VEGFA-220ENST00000519767 ZNF804BA4D1E1 1349 aa32.13■■■□□ 2.73
VEGFA-220ENST00000519767 MYH3P11055 1940 aa32.13■■■□□ 2.73
VEGFA-220ENST00000519767 FOXO4P98177 505 aa32.13■■■□□ 2.73
VEGFA-220ENST00000519767 IFIT5Q13325 482 aaKnown RBP32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms