RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 MCMDC2Q4G0Z9 681 aa21.54■■□□□ 1.04
CSGALNACT1-207ENST00000519222 TTC39AQ5SRH9 613 aa21.54■■□□□ 1.04
CSGALNACT1-207ENST00000519222 INTS4Q96HW7 963 aaKnown RBP21.54■■□□□ 1.04
CSGALNACT1-207ENST00000519222 PDE8AO60658 829 aa21.53■■□□□ 1.04
CSGALNACT1-207ENST00000519222 CCDC158Q5M9N0 1113 aa21.53■■□□□ 1.04
CSGALNACT1-207ENST00000519222 VPS53Q5VIR6 699 aa21.53■■□□□ 1.04
CSGALNACT1-207ENST00000519222 HELBQ8NG08 1087 aaPredicted RBP21.53■■□□□ 1.04
CSGALNACT1-207ENST00000519222 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
CSGALNACT1-207ENST00000519222 BCL9LQ86UU0 1499 aa21.53■■□□□ 1.04
CSGALNACT1-207ENST00000519222 GOLGA6L22H0YM25 854 aa21.52■■□□□ 1.04
CSGALNACT1-207ENST00000519222 CAMTA2O94983 1202 aa21.52■■□□□ 1.04
CSGALNACT1-207ENST00000519222 CLEC17AQ6ZS10 378 aa21.52■■□□□ 1.04
CSGALNACT1-207ENST00000519222 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
CSGALNACT1-207ENST00000519222 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSGALNACT1-207ENST00000519222 VPS72Q15906 364 aa21.51■■□□□ 1.03
CSGALNACT1-207ENST00000519222 CCDC83Q8IWF9 413 aa21.51■■□□□ 1.03
CSGALNACT1-207ENST00000519222 TM6SF1Q9BZW5 370 aa21.51■■□□□ 1.03
CSGALNACT1-207ENST00000519222 SNAP23O00161 211 aa21.51■■□□□ 1.03
CSGALNACT1-207ENST00000519222 ATP2B3Q16720 1220 aa21.51■■□□□ 1.03
CSGALNACT1-207ENST00000519222 USP21Q9UK80 565 aa21.51■■□□□ 1.03
CSGALNACT1-207ENST00000519222 EP400Q96L91 3159 aa21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 NECAB1Q8N987 351 aa21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 ZAP70P43403 619 aa21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 LINC00116Q8NCU8 138 aa21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 FBXO3Q9UK99 471 aa21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 DDX49Q9Y6V7 483 aaKnown RBP21.5■■□□□ 1.03
CSGALNACT1-207ENST00000519222 WNK3Q9BYP7 1800 aa21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 SH3TC1Q8TE82 1336 aa21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 PRPF40AO75400 957 aaKnown RBP21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 BRD1O95696 1058 aa21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 ME3Q16798 604 aa21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 UTP14AQ9BVJ6 771 aaKnown RBP21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
CSGALNACT1-207ENST00000519222 A0A0G2JLW4 131 aa21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 BLOC1S2Q6QNY1 142 aa21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 CYP21A2P08686 494 aa21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 NCLP19338 710 aaKnown RBP21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 PSMA5P28066 241 aa21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 JCADQ9P266 1359 aa21.48■■□□□ 1.03
CSGALNACT1-207ENST00000519222 USPL1Q5W0Q7 1092 aa21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 BRPF3Q9ULD4 1205 aa21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 RIC1Q4ADV7 1423 aa21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 RPAP1Q9BWH6 1393 aaPredicted RBP21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 RNF113AO15541 343 aaKnown RBP21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 ZMYM1Q5SVZ6 1142 aa21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 LMBRD1Q9NUN5 540 aa21.47■■□□□ 1.03
CSGALNACT1-207ENST00000519222 M0R2C6 588 aa21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 PDE8BO95263 885 aa21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 BICDL1Q6ZP65 573 aa21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 FNBP4Q8N3X1 1017 aaPredicted RBP21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 VGLL2Q8N8G2 317 aa21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 OSBP2Q969R2 916 aa21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 WASHC4Q2M389 1173 aa21.46■■□□□ 1.03
CSGALNACT1-207ENST00000519222 MAST3O60307 1309 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 RPS6KB1P23443 525 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 MCAMP43121 646 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 ST3GAL1Q11201 340 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 HELLSQ9NRZ9 838 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 SMC3Q9UQE7 1217 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 STK3Q13188 491 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 SKOR2Q2VWA4 1001 aaPredicted RBP21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 LRRC2Q9BYS8 371 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 HMG20BQ9P0W2 317 aa21.45■■□□□ 1.02
CSGALNACT1-207ENST00000519222 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.44■■□□□ 1.02
CSGALNACT1-207ENST00000519222 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
CSGALNACT1-207ENST00000519222 GOLGA6L3A6NEY3 463 aa21.44■■□□□ 1.02
CSGALNACT1-207ENST00000519222 HSPD1P10809 573 aaKnown RBP21.44■■□□□ 1.02
CSGALNACT1-207ENST00000519222 NEK1Q96PY6 1258 aa21.44■■□□□ 1.02
CSGALNACT1-207ENST00000519222 RFX7Q2KHR2 1363 aa21.44■■□□□ 1.02
CSGALNACT1-207ENST00000519222 NTSR2O95665 410 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 PHKA1P46020 1223 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 TOB2Q14106 344 aaPredicted RBP21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 TTLL5Q6EMB2 1281 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 MPHOSPH8Q99549 860 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 GDPD2Q9HCC8 539 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 NUP98P52948 1817 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 SYT1P21579 422 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 GJB2P29033 226 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 STOX1Q6ZVD7 989 aa21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.43■■□□□ 1.02
CSGALNACT1-207ENST00000519222 TSGA10IPQ3SY00 556 aa21.42■■□□□ 1.02
CSGALNACT1-207ENST00000519222 PUS7LQ9H0K6 701 aaKnown RBP21.42■■□□□ 1.02
CSGALNACT1-207ENST00000519222 PARP10Q53GL7 1025 aa21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 PTMSP20962 102 aa21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 MEX3CQ5U5Q3 659 aaKnown RBP21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 CCDC102BQ68D86 513 aa21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 ZSCAN31Q96LW9 406 aaPredicted RBP21.41■■□□□ 1.02
CSGALNACT1-207ENST00000519222 KLHL40Q2TBA0 621 aa21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 TPRNQ4KMQ1 711 aa21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 SH2B1Q9NRF2 756 aaPredicted RBP21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 NWD2Q9ULI1 1742 aa21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 CAVIN1Q6NZI2 390 aaKnown RBP21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 GAS2L3Q86XJ1 694 aa21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 WDR33Q9C0J8 1336 aaKnown RBP21.4■■□□□ 1.02
CSGALNACT1-207ENST00000519222 STX6O43752 255 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms